Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox1P53783 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Sox1P53783 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox1P53783 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Sox1P53783 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Sox1P53783 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.02■□□□□ 0.32
Sox1P53783 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Sox1P53783 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Sox1P53783 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox1P53783 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox1P53783 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sox1P53783 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.01■□□□□ 0.31
Sox1P53783 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.01■□□□□ 0.31
Sox1P53783 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.01■□□□□ 0.31
Sox1P53783 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox1P53783 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sox1P53783 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Sox1P53783 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Sox1P53783 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Sox1P53783 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Mir7023-201ENSMUST00000185093 64 ntBASIC17■□□□□ 0.31
Sox1P53783 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17■□□□□ 0.31
Sox1P53783 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17■□□□□ 0.31
Sox1P53783 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17■□□□□ 0.31
Sox1P53783 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sox1P53783 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox1P53783 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Gm7222-201ENSMUST00000117512 906 ntBASIC16.99■□□□□ 0.31
Sox1P53783 Gm23547-201ENSMUST00000158210 271 ntBASIC16.99■□□□□ 0.31
Sox1P53783 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.99■□□□□ 0.31
Sox1P53783 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.99■□□□□ 0.31
Sox1P53783 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.99■□□□□ 0.31
Sox1P53783 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.99■□□□□ 0.31
Sox1P53783 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox1P53783 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sox1P53783 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.98■□□□□ 0.31
Sox1P53783 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.98■□□□□ 0.31
Sox1P53783 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.98■□□□□ 0.31
Sox1P53783 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sox1P53783 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.98■□□□□ 0.31
Sox1P53783 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox1P53783 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms