Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-1P50220 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nkx2-1P50220 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Gm44549-201ENSMUST00000208351 577 ntBASIC13.85□□□□□ -0.19
Nkx2-1P50220 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-1P50220 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-1P50220 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx2-1P50220 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx2-1P50220 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx2-1P50220 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-1P50220 Gm13148-201ENSMUST00000118892 745 ntBASIC13.83□□□□□ -0.2
Nkx2-1P50220 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms