Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Xcl1P47993 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
Xcl1P47993 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Xcl1P47993 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Xcl1P47993 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.94□□□□□ -0.66
Xcl1P47993 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Xcl1P47993 Gm36858-201ENSMUST00000194501 2391 ntBASIC10.94□□□□□ -0.66
Xcl1P47993 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Xcl1P47993 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Xcl1P47993 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Xcl1P47993 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Xcl1P47993 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Xcl1P47993 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC10.93□□□□□ -0.66
Xcl1P47993 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Xcl1P47993 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Asic1-205ENSMUST00000228185 1818 ntBASIC10.93□□□□□ -0.66
Xcl1P47993 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.93□□□□□ -0.66
Xcl1P47993 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xcl1P47993 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Xcl1P47993 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.92□□□□□ -0.66
Xcl1P47993 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Xcl1P47993 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Xcl1P47993 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Xcl1P47993 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC10.92□□□□□ -0.66
Xcl1P47993 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC10.92□□□□□ -0.66
Xcl1P47993 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Xcl1P47993 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC10.92□□□□□ -0.66
Xcl1P47993 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Xcl1P47993 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Xcl1P47993 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xcl1P47993 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC10.91□□□□□ -0.66
Xcl1P47993 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Xcl1P47993 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Xcl1P47993 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC10.91□□□□□ -0.66
Xcl1P47993 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC10.91□□□□□ -0.66
Xcl1P47993 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC10.91□□□□□ -0.66
Xcl1P47993 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Xcl1P47993 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Xcl1P47993 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Xcl1P47993 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Xcl1P47993 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Xcl1P47993 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Xcl1P47993 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Xcl1P47993 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Xcl1P47993 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Xcl1P47993 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms