Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-2P42586 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Gm11336-201ENSMUST00000118168 334 ntBASIC15.29■□□□□ 0.04
Nkx2-2P42586 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Gm18032-201ENSMUST00000222541 538 ntBASIC15.29■□□□□ 0.04
Nkx2-2P42586 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx2-2P42586 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Gm22697-201ENSMUST00000175194 63 ntBASIC15.28■□□□□ 0.04
Nkx2-2P42586 Gm27389-201ENSMUST00000183622 195 ntBASIC15.28■□□□□ 0.04
Nkx2-2P42586 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-2P42586 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Nkx2-2P42586 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Gm18421-201ENSMUST00000204122 625 ntBASIC15.27■□□□□ 0.04
Nkx2-2P42586 Gm18101-201ENSMUST00000215769 548 ntBASIC15.27■□□□□ 0.04
Nkx2-2P42586 Gm21559-201ENSMUST00000220638 855 ntBASIC15.27■□□□□ 0.04
Nkx2-2P42586 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-2P42586 Gm8587-201ENSMUST00000076538 843 ntBASIC15.27■□□□□ 0.04
Nkx2-2P42586 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-2P42586 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-2P42586 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-2P42586 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-2P42586 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-2P42586 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-2P42586 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-2P42586 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms