Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Abca1P41233 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Abca1P41233 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.81□□□□□ -0.2
Abca1P41233 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.81□□□□□ -0.2
Abca1P41233 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.81□□□□□ -0.2
Abca1P41233 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Abca1P41233 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Abca1P41233 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Abca1P41233 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Abca1P41233 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.8□□□□□ -0.2
Abca1P41233 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Abca1P41233 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Abca1P41233 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.8□□□□□ -0.2
Abca1P41233 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.8□□□□□ -0.2
Abca1P41233 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Abca1P41233 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Abca1P41233 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Abca1P41233 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.79□□□□□ -0.2
Abca1P41233 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.79□□□□□ -0.2
Abca1P41233 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Abca1P41233 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.79□□□□□ -0.2
Abca1P41233 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.79□□□□□ -0.2
Abca1P41233 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.79□□□□□ -0.2
Abca1P41233 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca1P41233 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Abca1P41233 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Abca1P41233 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Abca1P41233 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.78□□□□□ -0.2
Abca1P41233 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.78□□□□□ -0.2
Abca1P41233 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.78□□□□□ -0.2
Abca1P41233 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.78□□□□□ -0.2
Abca1P41233 Gm2651-201ENSMUST00000203560 838 ntBASIC13.78□□□□□ -0.2
Abca1P41233 Gm18195-201ENSMUST00000207604 706 ntBASIC13.78□□□□□ -0.2
Abca1P41233 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Abca1P41233 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms