Protein–RNA interactions for Protein: P29037

Tbp, TATA-box-binding protein, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TbpP29037 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TbpP29037 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TbpP29037 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
TbpP29037 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.4□□□□□ -0.42
TbpP29037 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
TbpP29037 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TbpP29037 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TbpP29037 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TbpP29037 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.39□□□□□ -0.43
TbpP29037 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.39□□□□□ -0.43
TbpP29037 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TbpP29037 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TbpP29037 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TbpP29037 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TbpP29037 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.39□□□□□ -0.43
TbpP29037 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TbpP29037 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TbpP29037 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.38□□□□□ -0.43
TbpP29037 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TbpP29037 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Gm15546-201ENSMUST00000122095 826 ntBASIC12.38□□□□□ -0.43
TbpP29037 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
TbpP29037 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.38□□□□□ -0.43
TbpP29037 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
TbpP29037 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TbpP29037 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TbpP29037 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TbpP29037 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TbpP29037 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.38□□□□□ -0.43
TbpP29037 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TbpP29037 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.37□□□□□ -0.43
TbpP29037 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.37□□□□□ -0.43
TbpP29037 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TbpP29037 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.37□□□□□ -0.43
TbpP29037 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.37□□□□□ -0.43
TbpP29037 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TbpP29037 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TbpP29037 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TbpP29037 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TbpP29037 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms