Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdx1P18111 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdx1P18111 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cdx1P18111 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Gm12896-201ENSMUST00000118430 226 ntBASIC13.48□□□□□ -0.25
Cdx1P18111 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Gm2559-201ENSMUST00000201323 363 ntBASIC13.48□□□□□ -0.25
Cdx1P18111 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.48□□□□□ -0.25
Cdx1P18111 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.48□□□□□ -0.25
Cdx1P18111 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdx1P18111 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Cdx1P18111 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.48□□□□□ -0.25
Cdx1P18111 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Cdx1P18111 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx1P18111 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdx1P18111 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cdx1P18111 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.47□□□□□ -0.25
Cdx1P18111 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdx1P18111 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdx1P18111 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Cdx1P18111 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Cdx1P18111 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdx1P18111 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdx1P18111 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx1P18111 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx1P18111 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx1P18111 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx1P18111 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx1P18111 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx1P18111 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx1P18111 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx1P18111 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Cdx1P18111 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Cdx1P18111 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdx1P18111 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.46□□□□□ -0.25
Cdx1P18111 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdx1P18111 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdx1P18111 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cdx1P18111 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Cdx1P18111 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cdx1P18111 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdx1P18111 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cdx1P18111 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdx1P18111 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdx1P18111 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdx1P18111 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Cdx1P18111 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdx1P18111 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cdx1P18111 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.46□□□□□ -0.26
Cdx1P18111 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cdx1P18111 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdx1P18111 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdx1P18111 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdx1P18111 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Cdx1P18111 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.45□□□□□ -0.26
Cdx1P18111 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdx1P18111 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms