Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
P06320 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC10.59□□□□□ -0.71
P06320 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
P06320 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
P06320 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
P06320 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P06320 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
P06320 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC10.59□□□□□ -0.71
P06320 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Gm10655-201ENSMUST00000098658 1397 ntBASIC10.59□□□□□ -0.71
P06320 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC10.59□□□□□ -0.71
P06320 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC10.59□□□□□ -0.71
P06320 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P06320 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Gm11620-201ENSMUST00000118770 1845 ntBASIC10.58□□□□□ -0.72
P06320 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
P06320 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
P06320 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Gm27454-201ENSMUST00000185090 204 ntBASIC10.58□□□□□ -0.72
P06320 Appbp2os-202ENSMUST00000206972 447 ntBASIC10.58□□□□□ -0.72
P06320 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC10.58□□□□□ -0.72
P06320 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P06320 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P06320 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06320 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC10.57□□□□□ -0.72
P06320 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 AC108858.1-201ENSMUST00000228461 1498 ntBASIC10.57□□□□□ -0.72
P06320 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC10.57□□□□□ -0.72
P06320 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P06320 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC10.57□□□□□ -0.72
P06320 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
P06320 Gm13234-201ENSMUST00000120010 747 ntBASIC10.57□□□□□ -0.72
P06320 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC10.57□□□□□ -0.72
P06320 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC10.57□□□□□ -0.72
P06320 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P06320 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC10.57□□□□□ -0.72
P06320 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P06320 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P06320 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06320 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P06320 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06320 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06320 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms