Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tuba1bP05213 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.5■□□□□ 0.07
Tuba1bP05213 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Tuba1bP05213 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.5■□□□□ 0.07
Tuba1bP05213 Gm10138-203ENSMUST00000206952 366 ntBASIC15.5■□□□□ 0.07
Tuba1bP05213 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tuba1bP05213 Gm10812-201ENSMUST00000099864 546 ntBASIC15.5■□□□□ 0.07
Tuba1bP05213 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Tuba1bP05213 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Tuba1bP05213 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.5■□□□□ 0.07
Tuba1bP05213 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Tuba1bP05213 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Tuba1bP05213 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tuba1bP05213 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tuba1bP05213 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tuba1bP05213 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tuba1bP05213 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.49■□□□□ 0.07
Tuba1bP05213 Gm15375-201ENSMUST00000119510 849 ntBASIC15.49■□□□□ 0.07
Tuba1bP05213 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Tuba1bP05213 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tuba1bP05213 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tuba1bP05213 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tuba1bP05213 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tuba1bP05213 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tuba1bP05213 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tuba1bP05213 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Tuba1bP05213 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.49■□□□□ 0.07
Tuba1bP05213 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Tuba1bP05213 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tuba1bP05213 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Tuba1bP05213 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tuba1bP05213 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.48■□□□□ 0.07
Tuba1bP05213 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Tuba1bP05213 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Tuba1bP05213 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tuba1bP05213 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tuba1bP05213 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Tuba1bP05213 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Tuba1bP05213 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.47■□□□□ 0.07
Tuba1bP05213 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Tuba1bP05213 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.47■□□□□ 0.07
Tuba1bP05213 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Tuba1bP05213 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Tuba1bP05213 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.47■□□□□ 0.07
Tuba1bP05213 Gm42545-201ENSMUST00000202755 922 ntBASIC15.47■□□□□ 0.07
Tuba1bP05213 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Tuba1bP05213 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.47■□□□□ 0.07
Tuba1bP05213 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.47■□□□□ 0.07
Tuba1bP05213 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.47■□□□□ 0.07
Tuba1bP05213 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tuba1bP05213 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms