Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.04■□□□□ 0.32
ShdO88834 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.04■□□□□ 0.32
ShdO88834 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ShdO88834 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.04■□□□□ 0.32
ShdO88834 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShdO88834 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ShdO88834 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ShdO88834 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ShdO88834 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ShdO88834 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ShdO88834 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ShdO88834 Mir5130-201ENSMUST00000175160 84 ntBASIC17.03■□□□□ 0.32
ShdO88834 Gm10231-201ENSMUST00000181584 441 ntBASIC17.03■□□□□ 0.32
ShdO88834 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Gm10175-202ENSMUST00000208752 441 ntBASIC17.03■□□□□ 0.32
ShdO88834 Gm18959-201ENSMUST00000208954 655 ntBASIC17.03■□□□□ 0.32
ShdO88834 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.03■□□□□ 0.32
ShdO88834 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ShdO88834 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ShdO88834 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ShdO88834 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ShdO88834 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ShdO88834 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.02■□□□□ 0.32
ShdO88834 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.02■□□□□ 0.32
ShdO88834 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.02■□□□□ 0.32
ShdO88834 Gm13474-201ENSMUST00000122466 815 ntBASIC17.02■□□□□ 0.32
ShdO88834 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 Gm45058-201ENSMUST00000205810 766 ntBASIC17.02■□□□□ 0.32
ShdO88834 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.02■□□□□ 0.32
ShdO88834 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShdO88834 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShdO88834 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShdO88834 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ShdO88834 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShdO88834 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ShdO88834 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShdO88834 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.02■□□□□ 0.31
ShdO88834 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ShdO88834 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ShdO88834 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.01■□□□□ 0.31
ShdO88834 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
ShdO88834 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.01■□□□□ 0.31
ShdO88834 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShdO88834 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms