Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Gm12382-201ENSMUST00000122005 922 ntBASIC15.16■□□□□ 0.02
Pdlim3O70209 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.16■□□□□ 0.02
Pdlim3O70209 Gm8495-201ENSMUST00000188740 694 ntBASIC15.16■□□□□ 0.02
Pdlim3O70209 Gm37292-201ENSMUST00000192062 758 ntBASIC15.16■□□□□ 0.02
Pdlim3O70209 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim3O70209 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.16■□□□□ 0.02
Pdlim3O70209 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pdlim3O70209 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.15■□□□□ 0.02
Pdlim3O70209 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.15■□□□□ 0.02
Pdlim3O70209 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.15■□□□□ 0.02
Pdlim3O70209 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.15■□□□□ 0.02
Pdlim3O70209 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pdlim3O70209 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim3O70209 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Pdlim3O70209 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.14■□□□□ 0.01
Pdlim3O70209 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pdlim3O70209 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.14■□□□□ 0.01
Pdlim3O70209 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.14■□□□□ 0.01
Pdlim3O70209 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pdlim3O70209 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim3O70209 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.13■□□□□ 0.01
Pdlim3O70209 Gm17661-201ENSMUST00000170317 270 ntBASIC15.13■□□□□ 0.01
Pdlim3O70209 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pdlim3O70209 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.13■□□□□ 0.01
Pdlim3O70209 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim3O70209 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pdlim3O70209 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.12■□□□□ 0.01
Pdlim3O70209 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.12■□□□□ 0.01
Pdlim3O70209 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.12■□□□□ 0.01
Pdlim3O70209 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.12■□□□□ 0.01
Pdlim3O70209 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Gm37025-201ENSMUST00000195159 829 ntBASIC15.12■□□□□ 0.01
Pdlim3O70209 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.12■□□□□ 0.01
Pdlim3O70209 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.12■□□□□ 0.01
Pdlim3O70209 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms