Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ldb2O55203 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.58■□□□□ 0.25
Ldb2O55203 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ldb2O55203 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ldb2O55203 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ldb2O55203 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ldb2O55203 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ldb2O55203 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.58■□□□□ 0.24
Ldb2O55203 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.58■□□□□ 0.24
Ldb2O55203 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ldb2O55203 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.58■□□□□ 0.24
Ldb2O55203 Gm44450-201ENSMUST00000199528 114 ntBASIC16.58■□□□□ 0.24
Ldb2O55203 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ldb2O55203 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
Ldb2O55203 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.58■□□□□ 0.24
Ldb2O55203 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.58■□□□□ 0.24
Ldb2O55203 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ldb2O55203 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ldb2O55203 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ldb2O55203 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.57■□□□□ 0.24
Ldb2O55203 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.57■□□□□ 0.24
Ldb2O55203 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.57■□□□□ 0.24
Ldb2O55203 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ldb2O55203 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ldb2O55203 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.57■□□□□ 0.24
Ldb2O55203 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Ldb2O55203 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.57■□□□□ 0.24
Ldb2O55203 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ldb2O55203 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ldb2O55203 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ldb2O55203 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ldb2O55203 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Ldb2O55203 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ldb2O55203 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ldb2O55203 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Ldb2O55203 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ldb2O55203 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.56■□□□□ 0.24
Ldb2O55203 Gm26039-201ENSMUST00000158152 144 ntBASIC16.56■□□□□ 0.24
Ldb2O55203 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.56■□□□□ 0.24
Ldb2O55203 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.56■□□□□ 0.24
Ldb2O55203 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ldb2O55203 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ldb2O55203 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Ldb2O55203 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ldb2O55203 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.55■□□□□ 0.24
Ldb2O55203 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Ldb2O55203 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.55■□□□□ 0.24
Ldb2O55203 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ldb2O55203 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms