Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trdmt1O55055 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trdmt1O55055 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trdmt1O55055 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trdmt1O55055 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trdmt1O55055 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trdmt1O55055 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trdmt1O55055 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trdmt1O55055 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trdmt1O55055 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trdmt1O55055 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trdmt1O55055 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.33■□□□□ 0.52
Trdmt1O55055 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trdmt1O55055 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trdmt1O55055 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trdmt1O55055 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trdmt1O55055 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.32■□□□□ 0.52
Trdmt1O55055 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trdmt1O55055 Gm12350-201ENSMUST00000121208 462 ntBASIC18.32■□□□□ 0.52
Trdmt1O55055 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.32■□□□□ 0.52
Trdmt1O55055 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.32■□□□□ 0.52
Trdmt1O55055 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.32■□□□□ 0.52
Trdmt1O55055 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trdmt1O55055 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.32■□□□□ 0.52
Trdmt1O55055 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdmt1O55055 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.31■□□□□ 0.52
Trdmt1O55055 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trdmt1O55055 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trdmt1O55055 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trdmt1O55055 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Trdmt1O55055 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.31■□□□□ 0.52
Trdmt1O55055 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Trdmt1O55055 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.31■□□□□ 0.52
Trdmt1O55055 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.31■□□□□ 0.52
Trdmt1O55055 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trdmt1O55055 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdmt1O55055 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.3■□□□□ 0.52
Trdmt1O55055 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.3■□□□□ 0.52
Trdmt1O55055 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdmt1O55055 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trdmt1O55055 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdmt1O55055 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.3■□□□□ 0.52
Trdmt1O55055 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.3■□□□□ 0.52
Trdmt1O55055 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.3■□□□□ 0.52
Trdmt1O55055 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.3■□□□□ 0.52
Trdmt1O55055 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdmt1O55055 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trdmt1O55055 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trdmt1O55055 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.3■□□□□ 0.52
Trdmt1O55055 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.3■□□□□ 0.52
Trdmt1O55055 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trdmt1O55055 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdmt1O55055 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdmt1O55055 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdmt1O55055 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdmt1O55055 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trdmt1O55055 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trdmt1O55055 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trdmt1O55055 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trdmt1O55055 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.29■□□□□ 0.52
Trdmt1O55055 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trdmt1O55055 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trdmt1O55055 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.29■□□□□ 0.52
Trdmt1O55055 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.29■□□□□ 0.52
Trdmt1O55055 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trdmt1O55055 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trdmt1O55055 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trdmt1O55055 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms