Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Prom1O54990 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Prom1O54990 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Prom1O54990 Gm18206-201ENSMUST00000207027 926 ntBASIC18.35■□□□□ 0.53
Prom1O54990 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Prom1O54990 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.35■□□□□ 0.53
Prom1O54990 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prom1O54990 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Prom1O54990 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Gm7862-201ENSMUST00000121461 292 ntBASIC18.34■□□□□ 0.53
Prom1O54990 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.34■□□□□ 0.53
Prom1O54990 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.34■□□□□ 0.53
Prom1O54990 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Prom1O54990 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Prom1O54990 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Prom1O54990 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Prom1O54990 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prom1O54990 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Prom1O54990 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prom1O54990 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prom1O54990 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.33■□□□□ 0.53
Prom1O54990 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prom1O54990 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prom1O54990 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prom1O54990 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prom1O54990 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.33■□□□□ 0.52
Prom1O54990 Gm18195-201ENSMUST00000207604 706 ntBASIC18.33■□□□□ 0.52
Prom1O54990 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prom1O54990 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.33■□□□□ 0.52
Prom1O54990 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Prom1O54990 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prom1O54990 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.33■□□□□ 0.52
Prom1O54990 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prom1O54990 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prom1O54990 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Prom1O54990 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Prom1O54990 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prom1O54990 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prom1O54990 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Prom1O54990 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Prom1O54990 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Prom1O54990 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Prom1O54990 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Prom1O54990 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.32■□□□□ 0.52
Prom1O54990 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Prom1O54990 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prom1O54990 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Prom1O54990 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Prom1O54990 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Prom1O54990 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.31■□□□□ 0.52
Prom1O54990 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.31■□□□□ 0.52
Prom1O54990 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.31■□□□□ 0.52
Prom1O54990 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prom1O54990 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prom1O54990 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Prom1O54990 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prom1O54990 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prom1O54990 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prom1O54990 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms