Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Stx1aO35526 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.79■□□□□ 0.6
Stx1aO35526 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1aO35526 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.79■□□□□ 0.6
Stx1aO35526 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Stx1aO35526 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1aO35526 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1aO35526 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.78■□□□□ 0.6
Stx1aO35526 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.78■□□□□ 0.6
Stx1aO35526 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1aO35526 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Stx1aO35526 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Stx1aO35526 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1aO35526 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1aO35526 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1aO35526 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.78■□□□□ 0.6
Stx1aO35526 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.78■□□□□ 0.6
Stx1aO35526 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1aO35526 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.78■□□□□ 0.6
Stx1aO35526 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1aO35526 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Stx1aO35526 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.77■□□□□ 0.6
Stx1aO35526 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Stx1aO35526 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1aO35526 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Stx1aO35526 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1aO35526 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1aO35526 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1aO35526 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Stx1aO35526 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1aO35526 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.76■□□□□ 0.59
Stx1aO35526 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.76■□□□□ 0.59
Stx1aO35526 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1aO35526 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1aO35526 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1aO35526 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1aO35526 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Stx1aO35526 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1aO35526 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1aO35526 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Stx1aO35526 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Stx1aO35526 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1aO35526 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Stx1aO35526 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.74■□□□□ 0.59
Stx1aO35526 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.74■□□□□ 0.59
Stx1aO35526 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Stx1aO35526 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.74■□□□□ 0.59
Stx1aO35526 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Gm43183-201ENSMUST00000200632 547 ntBASIC18.74■□□□□ 0.59
Stx1aO35526 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Stx1aO35526 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1aO35526 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms