Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Top6blJ3QMY9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Top6blJ3QMY9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Top6blJ3QMY9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Top6blJ3QMY9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Top6blJ3QMY9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Top6blJ3QMY9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.44■□□□□ 0.38
Top6blJ3QMY9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Top6blJ3QMY9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.44■□□□□ 0.38
Top6blJ3QMY9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Top6blJ3QMY9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Top6blJ3QMY9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Top6blJ3QMY9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Top6blJ3QMY9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Top6blJ3QMY9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Top6blJ3QMY9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Top6blJ3QMY9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Top6blJ3QMY9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top6blJ3QMY9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Top6blJ3QMY9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top6blJ3QMY9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top6blJ3QMY9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top6blJ3QMY9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top6blJ3QMY9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top6blJ3QMY9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms