Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Raph1F2Z3U3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Raph1F2Z3U3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Raph1F2Z3U3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Gm11643-201ENSMUST00000119578 864 ntBASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Gm12933-201ENSMUST00000120203 872 ntBASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raph1F2Z3U3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Gm7290-201ENSMUST00000104990 617 ntBASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Gm12918-201ENSMUST00000120234 636 ntBASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Gm15710-201ENSMUST00000121821 636 ntBASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Gm26524-201ENSMUST00000192339 390 ntBASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Gm5075-201ENSMUST00000196916 622 ntBASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raph1F2Z3U3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Gm6576-201ENSMUST00000169678 883 ntBASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raph1F2Z3U3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raph1F2Z3U3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms