Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-2D3Z4R4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-2D3Z4R4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Gm7860-201ENSMUST00000121190 879 ntBASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-2D3Z4R4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Sybu-209ENSMUST00000228639 4113 ntBASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-2D3Z4R4 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms