Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smim17A0A504 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Smim17A0A504 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.2■□□□□ 0.02
Smim17A0A504 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.2■□□□□ 0.02
Smim17A0A504 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.2■□□□□ 0.02
Smim17A0A504 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Smim17A0A504 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Smim17A0A504 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smim17A0A504 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim17A0A504 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Smim17A0A504 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smim17A0A504 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.19■□□□□ 0.02
Smim17A0A504 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Smim17A0A504 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Smim17A0A504 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smim17A0A504 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smim17A0A504 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smim17A0A504 Gm21956-201ENSMUST00000179946 522 ntBASIC15.18■□□□□ 0.02
Smim17A0A504 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.18■□□□□ 0.02
Smim17A0A504 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smim17A0A504 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smim17A0A504 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Smim17A0A504 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.17■□□□□ 0.02
Smim17A0A504 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.17■□□□□ 0.02
Smim17A0A504 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 Gm43060-201ENSMUST00000200621 289 ntBASIC15.17■□□□□ 0.02
Smim17A0A504 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smim17A0A504 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smim17A0A504 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smim17A0A504 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.17■□□□□ 0.02
Smim17A0A504 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smim17A0A504 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.17■□□□□ 0.02
Smim17A0A504 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.17■□□□□ 0.02
Smim17A0A504 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim17A0A504 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 Gm10418-201ENSMUST00000100943 576 ntBASIC15.16■□□□□ 0.02
Smim17A0A504 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Smim17A0A504 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms