Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Il3ra-202ENSMUST00000223589 738 ntBASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm27000-201ENSMUST00000182943 842 ntBASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-2A0A0G2JDP3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms