Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trbc1A0A0A6YWV4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm18032-201ENSMUST00000222541 538 ntBASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.33■□□□□ 0.04
Trbc1A0A0A6YWV4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm10013-201ENSMUST00000106074 672 ntBASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Mir1668-201ENSMUST00000184114 107 ntBASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm18101-201ENSMUST00000215769 548 ntBASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbc1A0A0A6YWV4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm27000-201ENSMUST00000182943 842 ntBASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm7213-201ENSMUST00000215977 950 ntBASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trbc1A0A0A6YWV4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm22697-201ENSMUST00000175194 63 ntBASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm7977-201ENSMUST00000193787 748 ntBASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms