Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-3A0A075B6A4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Cap2-205ENSMUST00000225824 1634 ntBASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-3A0A075B6A4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms