Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8-1A0A075B641 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav8-1A0A075B641 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8-1A0A075B641 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.02□□□□□ -0.48
Trav8-1A0A075B641 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8-1A0A075B641 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8-1A0A075B641 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.02□□□□□ -0.48
Trav8-1A0A075B641 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8-1A0A075B641 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8-1A0A075B641 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8-1A0A075B641 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8-1A0A075B641 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8-1A0A075B641 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Gm12821-201ENSMUST00000120022 600 ntBASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Gm21956-201ENSMUST00000179946 522 ntBASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8-1A0A075B641 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Gm14281-201ENSMUST00000121700 1294 ntBASIC12□□□□□ -0.49
Trav8-1A0A075B641 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Trav8-1A0A075B641 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms