Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.23□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Dancr-204ENSMUST00000132389 2347 ntBASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Gm8495-201ENSMUST00000188740 694 ntBASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Gm42545-201ENSMUST00000202755 922 ntBASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.21□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm24841-201ENSMUST00000158676 357 ntBASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms