Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm11927-201ENSMUST00000118472 759 ntBASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Mir6349-201ENSMUST00000184059 97 ntBASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Gm2559-201ENSMUST00000201323 363 ntBASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-6A0A075B603 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav6-6A0A075B603 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-6A0A075B603 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-6A0A075B603 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav6-6A0A075B603 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-6A0A075B603 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-6A0A075B603 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Trav6-6A0A075B603 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-6A0A075B603 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-6A0A075B603 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-6A0A075B603 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Gm11643-201ENSMUST00000119578 864 ntBASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Mir2861-201ENSMUST00000175539 82 ntBASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Mir8112-201ENSMUST00000184382 131 ntBASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Gm4968-201ENSMUST00000071458 858 ntBASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms