Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm45058-201ENSMUST00000205810 766 ntBASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ighv1-55A0A075B5W6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm13186-201ENSMUST00000118031 316 ntBASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm6433-201ENSMUST00000118634 875 ntBASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-55A0A075B5W6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Actl10-202ENSMUST00000226583 1501 ntBASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-55A0A075B5W6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-55A0A075B5W6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv1-55A0A075B5W6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv1-55A0A075B5W6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Phf7-203ENSMUST00000226565 1971 ntBASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms