Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv4A0A075B5I2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Trbv4A0A075B5I2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv4A0A075B5I2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv4A0A075B5I2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv4A0A075B5I2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv4A0A075B5I2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv4A0A075B5I2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv4A0A075B5I2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Gm18115-201ENSMUST00000221209 621 ntBASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Trbv4A0A075B5I2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv4A0A075B5I2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
Trbv4A0A075B5I2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trbv4A0A075B5I2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Gm7213-201ENSMUST00000215977 950 ntBASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.7■□□□□ 0.26
Trbv4A0A075B5I2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms