Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL034374.1-201ENST00000406329 351 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 GTF2IP5-201ENST00000414608 731 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 DNAJC19P7-201ENST00000428811 344 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 RPL7AP61-201ENST00000443410 636 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AL035551.1-201ENST00000446931 348 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AC010733.1-201ENST00000451515 401 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 HMGB1P4-201ENST00000455362 567 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 EIF2S2P4-201ENST00000461070 984 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 RNU6-751P-201ENST00000516382 101 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AC107918.3-201ENST00000533272 382 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AC116553.2-201ENST00000564203 463 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 MIR6780A-201ENST00000615089 68 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 MIR7641-1-201ENST00000627518 61 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC068446.1-201ENST00000556425 1549 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 RNU6-152P-201ENST00000384037 107 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 MIR7-1-201ENST00000384871 110 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 ATP5HP3-201ENST00000396994 486 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 MIR298-201ENST00000401212 88 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 RNF19BPX-201ENST00000426224 625 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 MTND2P2-201ENST00000434633 945 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AL606490.8-201ENST00000441624 319 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC022431.1-201ENST00000450941 438 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 CALM1P2-201ENST00000452941 448 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AL356981.1-201ENST00000454879 684 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 NDUFA5P9-201ENST00000472609 340 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 RPL21P6-201ENST00000479171 504 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 PCNAP1-201ENST00000505363 709 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 RN7SKP276-201ENST00000516242 268 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 IGHV3-63-201ENST00000518422 341 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 OR8X1P-201ENST00000534542 869 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AL137072.1-201ENST00000603444 466 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 MIR7703-201ENST00000620784 77 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC073869.10-201ENST00000642016 354 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 AC107027.3-201ENST00000565095 3473 ntBASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPIPA1Q9UND3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.46□□□□□ -1.69
NPIPA1Q9UND3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.46□□□□□ -1.69
NPIPA1Q9UND3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms