Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AC019155.1-201ENST00000382242 574 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AC079355.1-201ENST00000421770 223 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 RPL21P43-201ENST00000425440 472 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 GSTA7P-201ENST00000438425 448 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 CNOT7P2-201ENST00000441051 832 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 RPL34P20-201ENST00000442771 351 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 MTND6P5-201ENST00000448266 512 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AP002371.1-201ENST00000463604 433 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 RPS18P6-201ENST00000476880 458 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 RN7SL205P-201ENST00000490174 284 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 HIGD1AP14-201ENST00000507617 282 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AC113398.2-201ENST00000507630 558 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AL592156.1-201ENST00000508758 304 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 NDUFB4P12-201ENST00000513465 390 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AC022832.1-201ENST00000530718 645 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AP006289.1-201ENST00000538089 277 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 HMGB3P26-201ENST00000560051 582 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AC124068.1-201ENST00000563131 678 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 AL627230.1-201ENST00000613077 211 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 SYT14P1-202ENST00000600441 1448 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMG20AQ9NP66 LINC02471-203ENST00000641941 4752 ntBASIC4.17□□□□□ -1.74
HMG20AQ9NP66 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AC083899.2-201ENST00000423285 1376 ntBASIC4.16□□□□□ -1.74
HMG20AQ9NP66 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 RPL23AP25-201ENST00000430973 463 ntBASIC4.16□□□□□ -1.74
HMG20AQ9NP66 RPL7P28-201ENST00000437739 740 ntBASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AURKAPS1-201ENST00000451805 1212 ntBASIC4.16□□□□□ -1.74
HMG20AQ9NP66 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AC105918.1-201ENST00000474399 838 ntBASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AC117394.1-201ENST00000477323 567 ntBASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AC092490.3-201ENST00000545370 572 ntBASIC4.16□□□□□ -1.74
HMG20AQ9NP66 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 MIR4675-201ENST00000577898 77 ntBASIC4.16□□□□□ -1.74
HMG20AQ9NP66 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AL139286.1-201ENST00000604465 483 ntBASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AC022467.1-201ENST00000614738 749 ntBASIC4.16□□□□□ -1.74
HMG20AQ9NP66 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 CASC19-222ENST00000641321 1173 ntBASIC4.16□□□□□ -1.74
HMG20AQ9NP66 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMG20AQ9NP66 AC017007.4-201ENST00000503353 1352 ntBASIC4.15□□□□□ -1.74
HMG20AQ9NP66 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
HMG20AQ9NP66 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HMG20AQ9NP66 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.15□□□□□ -1.74
HMG20AQ9NP66 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
HMG20AQ9NP66 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HMG20AQ9NP66 RNA5SP455-201ENST00000365190 119 ntBASIC4.15□□□□□ -1.75
HMG20AQ9NP66 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HMG20AQ9NP66 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMG20AQ9NP66 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms