Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX3Q99909 RPS4XP1-201ENST00000482189 787 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.41□□□□□ -1.7
SSX3Q99909 MYL12BP2-201ENST00000503948 512 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX3Q99909 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.41□□□□□ -1.7
SSX3Q99909 MTND6P2-201ENST00000512226 524 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 SNORA26.10-201ENST00000516427 141 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX3Q99909 AC079064.1-201ENST00000528365 362 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 BNIP3P1-201ENST00000547295 580 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX3Q99909 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.41□□□□□ -1.7
SSX3Q99909 BLZF2P-201ENST00000553776 1130 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AL136520.1-202ENST00000555494 763 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AC079148.1-201ENST00000565944 819 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX3Q99909 AC093765.1-201ENST00000603758 881 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AC009027.1-201ENST00000604510 479 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AL512329.2-201ENST00000607350 548 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AC245389.2-201ENST00000616023 576 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AC242843.1-201ENST00000618702 573 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX3Q99909 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX3Q99909 AC074101.1-201ENST00000637861 241 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX3Q99909 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SSX3Q99909 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX3Q99909 AL672167.1-204ENST00000641875 3017 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AC006042.3-201ENST00000454684 1469 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AL118496.1-201ENST00000440201 1812 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SSX3Q99909 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSX3Q99909 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SSX3Q99909 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SSX3Q99909 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.4□□□□□ -1.7
SSX3Q99909 GTF2H2B-203ENST00000508065 1432 ntBASIC4.4□□□□□ -1.7
SSX3Q99909 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SSX3Q99909 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SSX3Q99909 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SSX3Q99909 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SSX3Q99909 RNA5SP335-201ENST00000363817 110 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 MIR223-201ENST00000385204 110 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AL390774.1-201ENST00000411924 246 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.4□□□□□ -1.71
SSX3Q99909 SLC35E1P1-201ENST00000419313 864 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 RIMKLBP2-201ENST00000424737 654 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.4□□□□□ -1.71
SSX3Q99909 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.4□□□□□ -1.71
SSX3Q99909 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.4□□□□□ -1.71
SSX3Q99909 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 RPL7P56-201ENST00000429441 717 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 FAM96AP1-201ENST00000430879 482 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 RPS11P7-201ENST00000442125 465 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.4□□□□□ -1.71
SSX3Q99909 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 RPL31P44-201ENST00000447680 377 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.4□□□□□ -1.71
SSX3Q99909 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.4□□□□□ -1.71
SSX3Q99909 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.4□□□□□ -1.71
SSX3Q99909 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 AC023050.1-201ENST00000498198 304 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.4□□□□□ -1.71
SSX3Q99909 AC024558.1-201ENST00000505008 528 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AC008638.1-201ENST00000506035 866 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.4□□□□□ -1.71
SSX3Q99909 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.4□□□□□ -1.71
SSX3Q99909 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 EIF3KP3-201ENST00000514461 639 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AC138938.1-201ENST00000515431 782 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSX3Q99909 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.4□□□□□ -1.71
SSX3Q99909 CDC42P3-201ENST00000518493 633 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AC013701.1-201ENST00000522657 465 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.4□□□□□ -1.71
SSX3Q99909 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 AP003049.1-201ENST00000529418 457 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 AC122688.1-201ENST00000541494 223 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 AL109741.3-201ENST00000561748 592 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AC106785.3-201ENST00000564064 847 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSX3Q99909 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 AC007448.1-201ENST00000582714 234 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX3Q99909 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSX3Q99909 AL158196.1-201ENST00000616786 434 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSX3Q99909 AC011815.3-201ENST00000624194 473 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 198.5 ms