Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CASP3P1-201ENST00000446037 609 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.9□□□□□ -1.46
HPS3Q969F9 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.9□□□□□ -1.46
HPS3Q969F9 CDC42P1-201ENST00000456658 548 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 MTCO2P6-201ENST00000463134 685 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 RN7SL629P-201ENST00000489622 285 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.9□□□□□ -1.46
HPS3Q969F9 AC112673.1-201ENST00000513168 575 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.9□□□□□ -1.46
HPS3Q969F9 AP000859.1-201ENST00000525536 307 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 AP002812.4-201ENST00000532139 286 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HPS3Q969F9 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.9□□□□□ -1.46
HPS3Q969F9 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 AC023824.3-201ENST00000569003 562 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.9□□□□□ -1.46
HPS3Q969F9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.9□□□□□ -1.46
HPS3Q969F9 CCDC58P3-201ENST00000590792 430 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.9□□□□□ -1.46
HPS3Q969F9 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.9□□□□□ -1.46
HPS3Q969F9 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.9□□□□□ -1.46
HPS3Q969F9 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.9□□□□□ -1.46
HPS3Q969F9 AC004908.3-201ENST00000610248 625 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 U6.107-201ENST00000637108 79 ntBASIC5.9□□□□□ -1.46
HPS3Q969F9 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HPS3Q969F9 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.9□□□□□ -1.47
HPS3Q969F9 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HPS3Q969F9 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HPS3Q969F9 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
HPS3Q969F9 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.9□□□□□ -1.47
HPS3Q969F9 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.9□□□□□ -1.47
HPS3Q969F9 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
HPS3Q969F9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HPS3Q969F9 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HPS3Q969F9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.9□□□□□ -1.47
HPS3Q969F9 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 DDX18P4-201ENST00000511690 1966 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
HPS3Q969F9 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.89□□□□□ -1.47
HPS3Q969F9 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 RNU4-51P-201ENST00000364206 140 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HPS3Q969F9 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 U3.25-201ENST00000391209 220 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 RNU4-22P-201ENST00000411058 166 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 RPS3AP37-201ENST00000419176 745 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 MTND2P16-201ENST00000419987 799 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 RPL12P28-201ENST00000430852 489 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 RPL12P17-201ENST00000432393 498 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 AC073052.1-201ENST00000440417 714 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.89□□□□□ -1.47
HPS3Q969F9 AL589880.1-201ENST00000448271 287 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.89□□□□□ -1.47
HPS3Q969F9 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.89□□□□□ -1.47
HPS3Q969F9 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 FTH1P11-201ENST00000517577 551 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.89□□□□□ -1.47
HPS3Q969F9 DEFB130C-202ENST00000530001 230 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 AC139103.1-201ENST00000534696 1030 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 YWHABP2-201ENST00000540201 713 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HPS3Q969F9 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.89□□□□□ -1.47
HPS3Q969F9 MTND3P12-201ENST00000559068 328 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.89□□□□□ -1.47
HPS3Q969F9 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HPS3Q969F9 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HPS3Q969F9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.89□□□□□ -1.47
HPS3Q969F9 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 AC013244.1-201ENST00000604279 193 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 AC009948.4-201ENST00000604692 675 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.89□□□□□ -1.47
HPS3Q969F9 AL122125.1-201ENST00000616999 600 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 AL121594.5-201ENST00000631724 573 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 FRG1EP-201ENST00000634469 770 ntBASIC5.89□□□□□ -1.47
HPS3Q969F9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HPS3Q969F9 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
HPS3Q969F9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
HPS3Q969F9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HPS3Q969F9 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HPS3Q969F9 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.88□□□□□ -1.47
HPS3Q969F9 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms