Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 EI24P3-201ENST00000399046 1062 ntBASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 NFYAP1-201ENST00000431953 972 ntBASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 AC053481.3-201ENST00000577881 843 ntBASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 AC069366.1-201ENST00000583159 838 ntBASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 AP003497.2-201ENST00000624220 967 ntBASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 LINC00622-201ENST00000562811 1570 ntBASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 RNU1-130P-201ENST00000363930 160 ntBASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 AC062016.2-201ENST00000420950 676 ntBASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 MRPL48P1-201ENST00000445390 636 ntBASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 RPL23AP43-201ENST00000446445 471 ntBASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 AC106806.2-201ENST00000509365 500 ntBASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 MIR4298-201ENST00000584380 73 ntBASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 AC067931.1-201ENST00000624190 671 ntBASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 AC108467.2-201ENST00000617640 1597 ntBASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHROOM3Q8TF72 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 CASC19-204ENST00000641001 2055 ntBASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 NPM1P26-201ENST00000426339 738 ntBASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 AL445433.1-201ENST00000457507 257 ntBASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 OR8A2P-201ENST00000528631 952 ntBASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 AP000889.1-201ENST00000530968 660 ntBASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 AC091178.1-203ENST00000584586 279 ntBASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 ADAD1P2-201ENST00000588476 646 ntBASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 AC005034.4-201ENST00000603612 899 ntBASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 AL591034.3-201ENST00000605511 685 ntBASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.65□□□□□ -1.67
SHROOM3Q8TF72 OR14L1P-202ENST00000641545 3009 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 RNA5SP307-201ENST00000362863 116 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 RPL23AP65-201ENST00000475608 468 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 SAP18P1-201ENST00000512058 390 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 RN7SL435P-201ENST00000584418 282 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 SLC25A36P1-201ENST00000590111 465 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 AC115286.1-201ENST00000604298 434 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 AC245389.1-201ENST00000605141 529 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 AC108751.5-201ENST00000492880 1336 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms