Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.51□□□□□ -1.53
SNED1Q8TER0 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.51□□□□□ -1.53
SNED1Q8TER0 NDUFB4P12-201ENST00000513465 390 ntBASIC5.51□□□□□ -1.53
SNED1Q8TER0 RNU6-751P-201ENST00000516382 101 ntBASIC5.51□□□□□ -1.53
SNED1Q8TER0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNED1Q8TER0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.51□□□□□ -1.53
SNED1Q8TER0 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.51□□□□□ -1.53
SNED1Q8TER0 AC006116.5-201ENST00000591936 559 ntBASIC5.51□□□□□ -1.53
SNED1Q8TER0 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.51□□□□□ -1.53
SNED1Q8TER0 MIR6867-201ENST00000610636 67 ntBASIC5.51□□□□□ -1.53
SNED1Q8TER0 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.51□□□□□ -1.53
SNED1Q8TER0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNED1Q8TER0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNED1Q8TER0 AC140479.6-201ENST00000633535 357 ntBASIC5.51□□□□□ -1.53
SNED1Q8TER0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNED1Q8TER0 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNED1Q8TER0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNED1Q8TER0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.51□□□□□ -1.53
SNED1Q8TER0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNED1Q8TER0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNED1Q8TER0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SNED1Q8TER0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
SNED1Q8TER0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNED1Q8TER0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
SNED1Q8TER0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNED1Q8TER0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNED1Q8TER0 LINC01881-201ENST00000416103 412 ntBASIC5.5□□□□□ -1.53
SNED1Q8TER0 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.5□□□□□ -1.53
SNED1Q8TER0 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNED1Q8TER0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNED1Q8TER0 VTI1BP4-201ENST00000427516 527 ntBASIC5.5□□□□□ -1.53
SNED1Q8TER0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.5□□□□□ -1.53
SNED1Q8TER0 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.5□□□□□ -1.53
SNED1Q8TER0 RPS27AP13-201ENST00000498403 237 ntBASIC5.5□□□□□ -1.53
SNED1Q8TER0 AK4P6-201ENST00000505168 528 ntBASIC5.5□□□□□ -1.53
SNED1Q8TER0 AC008958.1-201ENST00000511047 682 ntBASIC5.5□□□□□ -1.53
SNED1Q8TER0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.5□□□□□ -1.53
SNED1Q8TER0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.5□□□□□ -1.53
SNED1Q8TER0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.5□□□□□ -1.53
SNED1Q8TER0 AC105148.1-201ENST00000604961 409 ntBASIC5.5□□□□□ -1.53
SNED1Q8TER0 OR8G7P-201ENST00000616658 848 ntBASIC5.5□□□□□ -1.53
SNED1Q8TER0 MIR8059-201ENST00000620427 81 ntBASIC5.5□□□□□ -1.53
SNED1Q8TER0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNED1Q8TER0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNED1Q8TER0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNED1Q8TER0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
SNED1Q8TER0 AC116158.1-201ENST00000560231 2129 ntBASIC5.5□□□□□ -1.53
SNED1Q8TER0 AL391684.1-202ENST00000641293 1636 ntBASIC5.5□□□□□ -1.53
SNED1Q8TER0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNED1Q8TER0 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.49□□□□□ -1.53
SNED1Q8TER0 RNA5SP283-201ENST00000365604 119 ntBASIC5.49□□□□□ -1.53
SNED1Q8TER0 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 EIF4HP2-201ENST00000424380 563 ntBASIC5.49□□□□□ -1.53
SNED1Q8TER0 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 AC098799.3-201ENST00000506095 438 ntBASIC5.49□□□□□ -1.53
SNED1Q8TER0 MTCO1P49-201ENST00000523429 802 ntBASIC5.49□□□□□ -1.53
SNED1Q8TER0 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 AC005014.3-201ENST00000605985 190 ntBASIC5.49□□□□□ -1.53
SNED1Q8TER0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 AC016252.1-201ENST00000609721 474 ntBASIC5.49□□□□□ -1.53
SNED1Q8TER0 AC008833.1-201ENST00000611633 691 ntBASIC5.49□□□□□ -1.53
SNED1Q8TER0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNED1Q8TER0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.49□□□□□ -1.53
SNED1Q8TER0 MIR208A-201ENST00000362287 71 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 RN7SKP33-201ENST00000410942 340 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 TCEA1P3-201ENST00000443005 880 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 RPL21P89-201ENST00000444021 467 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 RPL35P6-201ENST00000490024 372 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 AL132838.2-201ENST00000492041 314 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 AL133372.1-201ENST00000493565 745 ntBASIC5.48□□□□□ -1.53
SNED1Q8TER0 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNED1Q8TER0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.48□□□□□ -1.53
SNED1Q8TER0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms