Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AL121657.1-201ENST00000327215 531 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 RNU1-130P-201ENST00000363930 160 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AL358176.3-201ENST00000420757 454 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 COX6CP13-201ENST00000428703 226 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 RPL6P5-201ENST00000445678 828 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 RPL23AP24-201ENST00000458203 385 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AC005412.2-201ENST00000492004 341 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AC016559.2-201ENST00000510759 359 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 OR8Q1P-201ENST00000526467 655 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 PSMB7P1-201ENST00000556349 514 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 MIR7853-201ENST00000584820 132 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 RPL7P50-201ENST00000600588 727 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AC099676.1-201ENST00000608886 657 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 MIR6830-201ENST00000636015 70 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AC090017.1-201ENST00000548612 1779 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AC007618.1-201ENST00000366455 732 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 OR8V1P-201ENST00000395193 873 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 RN7SKP267-201ENST00000410381 285 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 RGS17P1-201ENST00000423358 553 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 NRBF2P3-201ENST00000432731 865 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 RN7SL303P-201ENST00000469773 251 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 RPSAP51-201ENST00000497462 645 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AC020593.1-201ENST00000507399 299 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AL133338.2-201ENST00000604292 736 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AC019193.2-201ENST00000610012 634 ntBASIC1.42□□□□□ -2.18
SYNE1Q8NF91 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
SYNE1Q8NF91 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC010300.1-201ENST00000600671 5134 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 QRSL1P2-201ENST00000418582 964 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 BX323845.1-201ENST00000432417 179 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 MTCYBP13-201ENST00000578634 1093 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AL161756.2-201ENST00000604597 246 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 PDCD6IPP1-202ENST00000622242 1064 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AL132640.2-201ENST00000559968 1698 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 OR14L1P-202ENST00000641545 3009 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 RLIMP1-201ENST00000339626 1680 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AP002530.1-201ENST00000405705 684 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 RAD23BP1-201ENST00000421404 1227 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 EIF4A2P4-201ENST00000458691 1196 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 F11-205ENST00000492972 1204 ntTSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AL161729.3-201ENST00000603533 673 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 FPGT-203ENST00000467578 601 ntTSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 IGBP1P4-201ENST00000503202 879 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC016839.1-201ENST00000578162 867 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC114781.5-201ENST00000615297 108 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms