Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 IGKV2-36-201ENST00000519999 223 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC38Q502W7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC040958.1-201ENST00000561102 201 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC123786.2-201ENST00000603459 275 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC010200.2-201ENST00000605098 235 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AP001005.3-201ENST00000622049 129 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC139713.2-210ENST00000641741 992 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 SCN1A-220ENST00000641603 12506 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC38Q502W7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC38Q502W7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 OR13C1P-202ENST00000641378 2919 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC38Q502W7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 STX3-208ENST00000641815 3236 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC38Q502W7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC38Q502W7 RNU6-236P-201ENST00000363886 106 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 RN7SKP6-201ENST00000364795 319 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC38Q502W7 RNA5SP284-201ENST00000384547 118 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 MIR92A2-201ENST00000385299 75 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AL603865.2-201ENST00000401679 213 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 RPL21P67-201ENST00000402896 478 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 RPL7P27-201ENST00000403775 720 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC092638.1-201ENST00000411966 1275 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 GSTM3P2-201ENST00000412746 530 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 COX5BP7-201ENST00000414780 274 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC106883.1-201ENST00000418805 562 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 OR5AW1P-201ENST00000426334 1006 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC009263.1-201ENST00000441193 1239 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC064862.4-201ENST00000442180 334 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 PPIAP20-201ENST00000449839 135 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 RANP1-206ENST00000455094 651 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC104164.3-201ENST00000467363 1258 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 NIFKP7-201ENST00000503365 834 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 EIF3KP3-201ENST00000514461 639 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 PRELID3BP4-201ENST00000515476 571 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC112191.2-201ENST00000522428 333 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC100784.1-201ENST00000522790 310 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC021451.1-201ENST00000523498 1129 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC006518.2-201ENST00000542513 940 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AL049872.1-201ENST00000556323 322 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 ZNF971P-201ENST00000562068 1249 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC012616.1-201ENST00000600294 197 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC017076.1-201ENST00000607613 578 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 AL118522.2-201ENST00000616045 615 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC38Q502W7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC38Q502W7 BTBD10P1-201ENST00000549824 1352 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC38Q502W7 AP000756.2-201ENST00000624168 2567 ntBASIC5.51□□□□□ -1.53
CCDC38Q502W7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms