Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 CFL1P1-202ENST00000432948 411 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC245047.2-201ENST00000441060 530 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AL163193.1-201ENST00000444895 788 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 EXTL2P1-201ENST00000446218 416 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 IFNWP4-201ENST00000453148 294 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC020593.1-201ENST00000507399 299 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC107016.1-201ENST00000550463 337 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 SNORD95-201ENST00000579879 68 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC091178.1-203ENST00000584586 279 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC110741.2-201ENST00000605278 268 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 SNORA17.5-201ENST00000630429 132 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC105074.1-201ENST00000623380 3095 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC095050.2-201ENST00000510748 1458 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 RNA5SP455-201ENST00000365190 119 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AL589647.1-201ENST00000402485 466 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AL078604.1-201ENST00000404609 466 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 MIR1183-201ENST00000408856 89 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 RNU2-50P-201ENST00000410494 143 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 DPPA2P3-201ENST00000411853 655 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 BMS1P13-201ENST00000417301 885 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 RPL24P2-201ENST00000421023 475 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AL645608.4-201ENST00000423619 154 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AL121776.1-201ENST00000429337 372 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 RPS29P14-201ENST00000431518 171 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC022431.1-201ENST00000450941 438 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC090142.1-201ENST00000465776 462 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 RPS4XP1-201ENST00000482189 787 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 RN7SL741P-201ENST00000482473 289 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 RNU2-30P-201ENST00000516209 141 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 MIR3614-201ENST00000581261 86 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 MIR4691-201ENST00000583764 85 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 MEMO1P5-201ENST00000604810 406 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC008115.4-201ENST00000619780 775 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC103858.2-201ENST00000621471 543 ntBASIC4.13□□□□□ -1.75
CCDC58Q4VC31 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC58Q4VC31 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 HSPD1P11-201ENST00000508643 1702 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms