Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PTPN9P43378 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.27□□□□□ -1.57
PTPN9P43378 RLIMP2-201ENST00000427891 1563 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PTPN9P43378 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PTPN9P43378 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 RNU5E-10P-201ENST00000363506 118 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 U8.4-201ENST00000363626 134 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN9P43378 OR6C64P-201ENST00000419708 825 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN9P43378 BX510359.3-201ENST00000422168 306 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 NPM1P22-201ENST00000427761 952 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.26□□□□□ -1.57
PTPN9P43378 AC114973.1-201ENST00000429057 632 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AL035458.1-201ENST00000433096 585 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN9P43378 ARF4P4-201ENST00000439608 520 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN9P43378 TCEA1P3-201ENST00000443005 880 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 OR7E125P-201ENST00000443450 846 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 EEF1B2P5-201ENST00000444820 548 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 MRPL35P2-201ENST00000448009 511 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 IGHV5-78-201ENST00000450948 295 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 HMGB1P4-201ENST00000455362 567 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 RPS20P4-201ENST00000461659 355 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 RPS17P2-201ENST00000461663 408 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC107015.1-201ENST00000466902 747 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN9P43378 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN9P43378 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.26□□□□□ -1.57
PTPN9P43378 HMGN2P25-201ENST00000486956 268 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC010350.1-201ENST00000504908 231 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 COX6B1P5-201ENST00000509843 249 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 SNORA31.13-201ENST00000516624 135 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC105031.1-201ENST00000518550 476 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN9P43378 AC012339.2-201ENST00000523996 453 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN9P43378 OR7E128P-201ENST00000532736 1024 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC092490.3-201ENST00000545370 572 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN9P43378 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PTPN9P43378 NMNAT1P1-201ENST00000554095 876 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.26□□□□□ -1.57
PTPN9P43378 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 AC006116.3-201ENST00000592968 361 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC012557.1-201ENST00000607115 611 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC018754.1-201ENST00000607486 925 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AL627230.1-201ENST00000613077 211 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AL591926.8-201ENST00000616876 211 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AL669942.2-201ENST00000620352 697 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN9P43378 AC024023.1-201ENST00000624530 922 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 AC073869.10-201ENST00000642016 354 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.26□□□□□ -1.57
PTPN9P43378 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PTPN9P43378 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 SCARNA15-201ENST00000607520 4325 ntBASIC5.26□□□□□ -1.57
PTPN9P43378 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN9P43378 AC004817.4-201ENST00000602396 3625 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTPN9P43378 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PTPN9P43378 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.25□□□□□ -1.57
PTPN9P43378 AC026523.2-201ENST00000625039 7739 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PTPN9P43378 AC021242.1-201ENST00000507315 2035 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PTPN9P43378 MUC2-202ENST00000613187 4845 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
PTPN9P43378 AC106754.1-201ENST00000562632 1513 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 AC017079.1-201ENST00000333650 415 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 RNU1-106P-201ENST00000384382 164 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 SNORA66-201ENST00000384792 133 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 LRRC37BP1-201ENST00000398851 714 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.25□□□□□ -1.57
PTPN9P43378 TCEA1P2-201ENST00000420496 906 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 AC104333.2-201ENST00000422630 192 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPN9P43378 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPN9P43378 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 RPL35AP21-201ENST00000437667 333 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 RPL34P20-201ENST00000442771 351 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 RPL21P18-201ENST00000469899 480 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTPN9P43378 RN7SL629P-201ENST00000489622 285 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.25□□□□□ -1.57
PTPN9P43378 PRELID3BP6-201ENST00000503839 571 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 HAUS1P1-201ENST00000505275 832 ntBASIC5.25□□□□□ -1.57
PTPN9P43378 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPN9P43378 RNU6-1308P-201ENST00000516817 103 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms