Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
CIITAP33076 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CIITAP33076 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CIITAP33076 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CIITAP33076 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CIITAP33076 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CIITAP33076 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CIITAP33076 AC099654.2-201ENST00000433031 1980 ntBASIC5.58□□□□□ -1.52
CIITAP33076 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CIITAP33076 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CIITAP33076 TCP11X1-202ENST00000622971 1372 ntBASIC5.58□□□□□ -1.52
CIITAP33076 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CIITAP33076 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CIITAP33076 RNU6-584P-201ENST00000410350 95 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AC007738.1-201ENST00000413892 348 ntBASIC5.58□□□□□ -1.52
CIITAP33076 RBMY2KP-201ENST00000418221 992 ntBASIC5.58□□□□□ -1.52
CIITAP33076 MTCYBP7-201ENST00000419540 1134 ntBASIC5.58□□□□□ -1.52
CIITAP33076 GNG5P5-201ENST00000420444 220 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.58□□□□□ -1.52
CIITAP33076 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.58□□□□□ -1.52
CIITAP33076 MTCYBP15-201ENST00000433123 1127 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AL606490.7-201ENST00000433136 191 ntBASIC5.58□□□□□ -1.52
CIITAP33076 MTND2P21-201ENST00000436242 1042 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.58□□□□□ -1.52
CIITAP33076 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.58□□□□□ -1.52
CIITAP33076 MRPL35P2-201ENST00000448009 511 ntBASIC5.58□□□□□ -1.52
CIITAP33076 OR52J1P-201ENST00000450596 932 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.58□□□□□ -1.52
CIITAP33076 HSPE1P22-201ENST00000456856 327 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.58□□□□□ -1.52
CIITAP33076 MTCO1P31-201ENST00000506355 492 ntBASIC5.58□□□□□ -1.52
CIITAP33076 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.58□□□□□ -1.52
CIITAP33076 HMGB1P47-201ENST00000511281 589 ntBASIC5.58□□□□□ -1.52
CIITAP33076 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.58□□□□□ -1.52
CIITAP33076 AC067904.2-201ENST00000517322 1283 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AC105031.1-201ENST00000518550 476 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.58□□□□□ -1.52
CIITAP33076 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.58□□□□□ -1.52
CIITAP33076 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.58□□□□□ -1.52
CIITAP33076 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CIITAP33076 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CIITAP33076 UBTFL9-201ENST00000534504 1148 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.58□□□□□ -1.52
CIITAP33076 AGGF1P9-201ENST00000561884 913 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.58□□□□□ -1.52
CIITAP33076 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.58□□□□□ -1.52
CIITAP33076 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.58□□□□□ -1.52
CIITAP33076 BMS1P7-201ENST00000602440 1052 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AC068620.3-201ENST00000602749 560 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.58□□□□□ -1.52
CIITAP33076 AC006840.1-201ENST00000623069 542 ntBASIC5.58□□□□□ -1.52
CIITAP33076 AC092159.4-201ENST00000624944 550 ntBASIC5.58□□□□□ -1.52
CIITAP33076 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CIITAP33076 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CIITAP33076 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CIITAP33076 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CIITAP33076 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.58□□□□□ -1.52
CIITAP33076 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CIITAP33076 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
CIITAP33076 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CIITAP33076 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CIITAP33076 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.57□□□□□ -1.52
CIITAP33076 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CIITAP33076 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.57□□□□□ -1.52
CIITAP33076 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CIITAP33076 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.57□□□□□ -1.52
CIITAP33076 RNA5SP87-201ENST00000384155 118 ntBASIC5.57□□□□□ -1.52
CIITAP33076 EI24P3-201ENST00000399046 1062 ntBASIC5.57□□□□□ -1.52
CIITAP33076 AL357515.1-201ENST00000402967 542 ntBASIC5.57□□□□□ -1.52
CIITAP33076 RN7SKP199-201ENST00000410325 305 ntBASIC5.57□□□□□ -1.52
CIITAP33076 OR51A6P-201ENST00000418680 1004 ntBASIC5.57□□□□□ -1.52
CIITAP33076 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CIITAP33076 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.57□□□□□ -1.52
CIITAP33076 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.57□□□□□ -1.52
CIITAP33076 AC104837.2-201ENST00000427236 424 ntBASIC5.57□□□□□ -1.52
CIITAP33076 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.57□□□□□ -1.52
CIITAP33076 RPL35AP21-201ENST00000437667 333 ntBASIC5.57□□□□□ -1.52
CIITAP33076 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.57□□□□□ -1.52
CIITAP33076 AL645931.1-201ENST00000439737 410 ntBASIC5.57□□□□□ -1.52
CIITAP33076 AC004854.1-201ENST00000440356 349 ntBASIC5.57□□□□□ -1.52
CIITAP33076 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.57□□□□□ -1.52
CIITAP33076 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.57□□□□□ -1.52
CIITAP33076 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.57□□□□□ -1.52
CIITAP33076 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.57□□□□□ -1.52
CIITAP33076 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.57□□□□□ -1.52
CIITAP33076 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.57□□□□□ -1.52
CIITAP33076 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.57□□□□□ -1.52
CIITAP33076 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.57□□□□□ -1.52
CIITAP33076 AP000859.1-201ENST00000525536 307 ntBASIC5.57□□□□□ -1.52
CIITAP33076 MORF4L1P3-201ENST00000525966 950 ntBASIC5.57□□□□□ -1.52
CIITAP33076 EIF4A2P5-201ENST00000529914 499 ntBASIC5.57□□□□□ -1.52
CIITAP33076 OSBPL9P3-201ENST00000534523 595 ntBASIC5.57□□□□□ -1.52
CIITAP33076 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.57□□□□□ -1.52
CIITAP33076 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CIITAP33076 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.57□□□□□ -1.52
CIITAP33076 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.57□□□□□ -1.52
CIITAP33076 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.57□□□□□ -1.52
CIITAP33076 MIR3934-201ENST00000579806 107 ntBASIC5.57□□□□□ -1.52
CIITAP33076 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.57□□□□□ -1.52
CIITAP33076 AC127024.5-201ENST00000580085 462 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms