Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.7□□□□□ -1.66
ZIC3O60481 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.7□□□□□ -1.66
ZIC3O60481 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.7□□□□□ -1.66
ZIC3O60481 AL035407.2-201ENST00000454090 378 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 AC092155.2-201ENST00000454675 477 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 METTL15P1-201ENST00000481421 1045 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ZIC3O60481 RPL21P131-201ENST00000497298 483 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.7□□□□□ -1.66
ZIC3O60481 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZIC3O60481 AC112673.1-201ENST00000513168 575 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.7□□□□□ -1.66
ZIC3O60481 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.7□□□□□ -1.66
ZIC3O60481 NDUFS5P6-201ENST00000529136 295 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.7□□□□□ -1.66
ZIC3O60481 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.7□□□□□ -1.66
ZIC3O60481 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.7□□□□□ -1.66
ZIC3O60481 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.7□□□□□ -1.66
ZIC3O60481 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.7□□□□□ -1.66
ZIC3O60481 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.7□□□□□ -1.66
ZIC3O60481 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.7□□□□□ -1.66
ZIC3O60481 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.7□□□□□ -1.66
ZIC3O60481 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.7□□□□□ -1.66
ZIC3O60481 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.7□□□□□ -1.66
ZIC3O60481 TAS2R6P-201ENST00000605022 826 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 Z99289.3-201ENST00000605586 594 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 AC004908.3-201ENST00000610248 625 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 AC009464.1-201ENST00000615731 469 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.7□□□□□ -1.66
ZIC3O60481 AC007342.8-201ENST00000623278 678 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.7□□□□□ -1.66
ZIC3O60481 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZIC3O60481 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.7□□□□□ -1.66
ZIC3O60481 AC093671.1-201ENST00000624981 2929 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ZIC3O60481 AC006210.2-201ENST00000367074 1545 ntBASIC4.7□□□□□ -1.66
ZIC3O60481 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZIC3O60481 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZIC3O60481 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZIC3O60481 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.7□□□□□ -1.66
ZIC3O60481 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZIC3O60481 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ZIC3O60481 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZIC3O60481 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
ZIC3O60481 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
ZIC3O60481 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.69□□□□□ -1.66
ZIC3O60481 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZIC3O60481 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZIC3O60481 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZIC3O60481 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZIC3O60481 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ZIC3O60481 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 RNU6-543P-201ENST00000362576 108 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 DNAJC19P6-201ENST00000401853 280 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 HIGD1AP15-201ENST00000416198 280 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.69□□□□□ -1.66
ZIC3O60481 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 RPS27AP6-201ENST00000427962 448 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ZIC3O60481 AC090018.1-201ENST00000434369 367 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.69□□□□□ -1.66
ZIC3O60481 MTND1P31-201ENST00000449206 961 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 RPSAP51-201ENST00000497462 645 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.69□□□□□ -1.66
ZIC3O60481 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.69□□□□□ -1.66
ZIC3O60481 AC104417.1-201ENST00000523974 751 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 AP002373.2-201ENST00000541631 1060 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 AC006518.2-201ENST00000542513 940 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 AC008083.2-201ENST00000546707 476 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.69□□□□□ -1.66
ZIC3O60481 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.69□□□□□ -1.66
ZIC3O60481 AC009712.1-201ENST00000564938 316 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 RN7SL290P-201ENST00000578661 300 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ZIC3O60481 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.69□□□□□ -1.66
ZIC3O60481 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.69□□□□□ -1.66
ZIC3O60481 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.69□□□□□ -1.66
ZIC3O60481 AL445222.1-201ENST00000607259 628 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 AC013468.1-201ENST00000608680 598 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 AC118658.2-201ENST00000618697 459 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 AC015660.5-201ENST00000623238 564 ntBASIC4.69□□□□□ -1.66
ZIC3O60481 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ZIC3O60481 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
ZIC3O60481 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
ZIC3O60481 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms