Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC011487.3-201ENST00000593607 453 ntBASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 AC068790.5-201ENST00000602741 355 ntBASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 AC010200.2-201ENST00000605098 235 ntBASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 AL137246.1-201ENST00000607072 977 ntBASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 NF1P10-201ENST00000613227 742 ntBASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RBFOX3A6NFN3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 IQCB2P-201ENST00000401788 1633 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC012020.1-201ENST00000624541 1728 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC105074.1-201ENST00000623380 3095 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 RNU1-15P-201ENST00000353977 144 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AL357515.1-201ENST00000402967 542 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 RN7SKP167-201ENST00000411047 285 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 RPL6P29-201ENST00000414863 865 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 UBTFL3-201ENST00000418934 1024 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 RPL21P43-201ENST00000425440 472 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 YWHAEP5-201ENST00000431545 765 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 SUMO2P3-201ENST00000438311 288 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 CACYBPP1-201ENST00000438592 684 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 Z92846.1-201ENST00000456203 268 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 RPL31P53-201ENST00000457065 348 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 RPL7AP52-201ENST00000458096 790 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 APOOP2-201ENST00000461561 539 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 UBTFL6-201ENST00000477929 1024 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 RN7SL101P-201ENST00000496350 279 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 RN7SL466P-201ENST00000497546 295 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC139783.2-201ENST00000504847 1145 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 RPS4XP20-201ENST00000505751 772 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC090281.1-201ENST00000523019 276 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 OR5M7P-201ENST00000526140 972 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC008147.3-201ENST00000548666 354 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AL589674.2-201ENST00000604304 337 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 MIR6768-201ENST00000610734 72 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 MIR6862-1-201ENST00000613016 70 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC116447.1-201ENST00000613153 453 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 MIR6862-2-201ENST00000614755 70 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RBFOX3A6NFN3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 AC097504.1-201ENST00000515103 2415 ntBASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 RNU6-1251P-201ENST00000364502 107 ntBASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 AL034374.1-201ENST00000406329 351 ntBASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 OR3A2-201ENST00000408891 1076 ntBASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 RN7SKP114-201ENST00000410327 279 ntBASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 RNU6-603P-201ENST00000411403 107 ntBASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 GLUD1P9-201ENST00000420997 1173 ntBASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 CHEK2P5-201ENST00000423877 246 ntBASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 RPS20P1-201ENST00000434853 354 ntBASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 RPL12P46-201ENST00000436610 195 ntBASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 AL390119.1-201ENST00000440329 312 ntBASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.69□□□□□ -1.82
RBFOX3A6NFN3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms