Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC112198.4-201ENST00000515450 351 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC113192.3-201ENST00000529152 742 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC006349.1-201ENST00000555526 235 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC092868.3-201ENST00000560515 784 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC084759.1-201ENST00000561168 290 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC079148.1-201ENST00000565944 819 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC245884.10-201ENST00000597355 337 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC008536.1-201ENST00000602872 669 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AL049794.2-201ENST00000616301 365 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AL121890.2-201ENST00000617644 465 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 AC008079.2-201ENST00000623543 20396 ntBASIC5.3□□□□□ -1.56
SNX9Q9Y5X1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 RN7SKP149-201ENST00000363008 344 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 SNORA73.1-201ENST00000363107 205 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC093414.1-201ENST00000434712 514 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 RNF2P1-201ENST00000442955 1010 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC245028.2-201ENST00000458673 253 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 RPS17P2-201ENST00000461663 408 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC105918.1-201ENST00000474399 838 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC108729.2-201ENST00000476543 840 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 VTA1P2-201ENST00000520205 911 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC009117.1-201ENST00000563948 554 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 ZNF92P2-201ENST00000600543 1059 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC133794.1-201ENST00000602731 914 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AL031320.1-201ENST00000604177 357 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AC034229.4-201ENST00000607861 441 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 FAM25E-202ENST00000608562 189 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 AP001784.1-201ENST00000624107 428 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 STX3-208ENST00000641815 3236 ntBASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX9Q9Y5X1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 OR4K17-201ENST00000315543 1032 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 MIR365B-201ENST00000362317 111 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 RN7SKP103-201ENST00000363848 320 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 RNU6-609P-201ENST00000365459 107 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 RNU6-925P-201ENST00000384629 104 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 RPL5P19-201ENST00000404228 893 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 GTF2IP5-201ENST00000414608 731 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 MTND4P11-201ENST00000417020 1058 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC013429.2-201ENST00000418798 781 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 UBE2D3P3-201ENST00000426992 425 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 MTCYBP32-201ENST00000427945 1084 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 ZNF965P-201ENST00000432501 817 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC073052.1-201ENST00000440417 714 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms