Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB1Q9Y5F3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB1Q9Y5F3 AC068790.7-201ENST00000602347 528 ntBASIC5.65□□□□□ -1.5
PCDHB1Q9Y5F3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB1Q9Y5F3 AL139407.1-201ENST00000613826 1175 ntBASIC5.65□□□□□ -1.5
PCDHB1Q9Y5F3 AC008115.3-201ENST00000614874 549 ntBASIC5.65□□□□□ -1.5
PCDHB1Q9Y5F3 AC015712.7-201ENST00000615211 635 ntBASIC5.65□□□□□ -1.5
PCDHB1Q9Y5F3 AC004943.3-201ENST00000624116 600 ntBASIC5.65□□□□□ -1.5
PCDHB1Q9Y5F3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB1Q9Y5F3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB1Q9Y5F3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PCDHB1Q9Y5F3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB1Q9Y5F3 PROS2P-201ENST00000474651 1951 ntBASIC5.65□□□□□ -1.51
PCDHB1Q9Y5F3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PCDHB1Q9Y5F3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB1Q9Y5F3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PCDHB1Q9Y5F3 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.65□□□□□ -1.51
PCDHB1Q9Y5F3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PCDHB1Q9Y5F3 AC004076.2-201ENST00000620532 3323 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC092070.2-203ENST00000598377 3644 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AP000432.2-201ENST00000624164 2048 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 CASC19-260ENST00000641828 2001 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 YES1P1-201ENST00000418510 1628 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AL159987.1-201ENST00000347911 293 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 snoZ40.1-201ENST00000364540 72 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 RN7SKP186-201ENST00000365371 303 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 Y_RNA.465-201ENST00000384293 102 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 UBE2D3P1-201ENST00000436669 444 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AL390119.1-201ENST00000440329 312 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AL606490.1-201ENST00000452266 765 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 ATP5LP5-201ENST00000483050 299 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC073522.1-201ENST00000483312 377 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC008953.1-201ENST00000497334 318 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 NDUFA5P12-201ENST00000503796 343 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 MRPS33P3-201ENST00000513456 322 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 RNA5SP92-201ENST00000516437 110 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC023632.1-201ENST00000518463 375 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC137627.1-201ENST00000545761 289 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 DPPA2P4-201ENST00000563717 878 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 MIR3912-201ENST00000577566 105 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC022884.3-201ENST00000579571 248 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AL392112.1-201ENST00000605115 829 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC018638.7-201ENST00000605836 1114 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AP000238.1-201ENST00000608759 426 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 VIS1.1-201ENST00000610517 203 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC009318.3-201ENST00000616916 503 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AL603755.1-201ENST00000619504 163 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC007490.1-201ENST00000624321 703 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC005618.4-201ENST00000625053 554 ntBASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB1Q9Y5F3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms