Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 RN7SL97P-201ENST00000486780 299 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 RN7SL814P-201ENST00000487715 300 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 HMGB1P21-201ENST00000502313 581 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AC103833.1-201ENST00000517442 172 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 OR5AN2P-201ENST00000534535 896 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AL161713.1-201ENST00000555538 145 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AC051619.2-201ENST00000559063 397 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AC044860.2-201ENST00000561005 179 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AC011626.1-201ENST00000604710 562 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AL022394.1-201ENST00000606979 292 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 OR6R2P-201ENST00000609216 300 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 AL136964.1-201ENST00000622038 2990 ntBASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
CHMP4AQ9BY43 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 AL589826.1-201ENST00000340697 249 ntBASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 RN7SKP278-201ENST00000410504 342 ntBASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 ZFAND6P1-201ENST00000434138 605 ntBASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 LYPLA1P1-201ENST00000434514 622 ntBASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 AC025260.1-201ENST00000548858 430 ntBASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 AC087763.1-201ENST00000603391 286 ntBASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 AC004775.1-201ENST00000607389 753 ntBASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 BX323046.1-201ENST00000610145 535 ntBASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CHMP4AQ9BY43 ZNF652P1-201ENST00000442420 1309 ntBASIC6.65□□□□□ -1.35
CHMP4AQ9BY43 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CHMP4AQ9BY43 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC6.65□□□□□ -1.35
CHMP4AQ9BY43 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CHMP4AQ9BY43 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CHMP4AQ9BY43 HSPA8P19-201ENST00000505359 1517 ntBASIC6.65□□□□□ -1.35
CHMP4AQ9BY43 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
CHMP4AQ9BY43 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CHMP4AQ9BY43 AL137100.1-201ENST00000556703 1620 ntBASIC6.65□□□□□ -1.35
CHMP4AQ9BY43 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 OR52E6-202ENST00000379946 954 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AL450992.3-201ENST00000413192 568 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC234782.4-201ENST00000417646 1048 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 MTCO3P4-201ENST00000419236 787 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 EI24P4-201ENST00000423683 1078 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 RWDD4P2-201ENST00000426392 563 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 NOP56P2-201ENST00000447491 769 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 RPL7AP6-201ENST00000477943 801 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC004453.1-201ENST00000487895 408 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 RWDD4P1-201ENST00000488019 565 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 RN7SL244P-201ENST00000493405 297 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC097173.1-201ENST00000505862 819 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 COX6B1P6-201ENST00000522347 255 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AP000676.2-201ENST00000529711 301 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms