Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ENSAP1-201ENST00000392855 326 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 RN7SKP159-201ENST00000410657 292 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 RPL21P91-201ENST00000429231 479 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 AL035246.1-201ENST00000433554 1255 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 AC009963.4-201ENST00000448535 339 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.85□□□□□ -1.47
ABCA3Q99758 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.85□□□□□ -1.47
ABCA3Q99758 AC010374.1-201ENST00000503762 1237 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.85□□□□□ -1.47
ABCA3Q99758 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.85□□□□□ -1.47
ABCA3Q99758 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.85□□□□□ -1.47
ABCA3Q99758 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.85□□□□□ -1.47
ABCA3Q99758 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.85□□□□□ -1.47
ABCA3Q99758 AC130352.1-201ENST00000602979 661 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 DDX18P5-201ENST00000534547 1306 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ABCA3Q99758 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ABCA3Q99758 AP001029.2-203ENST00000589795 4910 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
ABCA3Q99758 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ABCA3Q99758 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ABCA3Q99758 AC105074.1-201ENST00000623380 3095 ntBASIC5.84□□□□□ -1.47
ABCA3Q99758 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.84□□□□□ -1.47
ABCA3Q99758 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
ABCA3Q99758 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ABCA3Q99758 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ABCA3Q99758 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ABCA3Q99758 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
ABCA3Q99758 MIR449B-201ENST00000384995 97 ntBASIC5.84□□□□□ -1.47
ABCA3Q99758 RPS20P14-201ENST00000412545 360 ntBASIC5.84□□□□□ -1.47
ABCA3Q99758 RPL35AP21-201ENST00000437667 333 ntBASIC5.84□□□□□ -1.47
ABCA3Q99758 AL500522.2-201ENST00000448562 343 ntBASIC5.84□□□□□ -1.47
ABCA3Q99758 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ABCA3Q99758 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.84□□□□□ -1.47
ABCA3Q99758 AC120057.2-201ENST00000571520 271 ntBASIC5.84□□□□□ -1.47
ABCA3Q99758 AC005034.4-201ENST00000603612 899 ntBASIC5.84□□□□□ -1.47
ABCA3Q99758 AC079587.1-201ENST00000603846 277 ntBASIC5.84□□□□□ -1.47
ABCA3Q99758 AC084757.4-201ENST00000616350 526 ntBASIC5.84□□□□□ -1.47
ABCA3Q99758 AC091953.5-201ENST00000622919 233 ntBASIC5.84□□□□□ -1.47
ABCA3Q99758 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ABCA3Q99758 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ABCA3Q99758 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ABCA3Q99758 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.84□□□□□ -1.48
ABCA3Q99758 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
ABCA3Q99758 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.84□□□□□ -1.48
ABCA3Q99758 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCA3Q99758 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCA3Q99758 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
ABCA3Q99758 CASC19-206ENST00000641028 1430 ntBASIC5.83□□□□□ -1.48
ABCA3Q99758 Y_RNA.333-201ENST00000365274 102 ntBASIC5.83□□□□□ -1.48
ABCA3Q99758 RNA5SP151-201ENST00000365632 117 ntBASIC5.83□□□□□ -1.48
ABCA3Q99758 RPL6P29-201ENST00000414863 865 ntBASIC5.83□□□□□ -1.48
ABCA3Q99758 AC115285.1-201ENST00000424879 736 ntBASIC5.83□□□□□ -1.48
ABCA3Q99758 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ABCA3Q99758 TBCAP1-201ENST00000436520 327 ntBASIC5.83□□□□□ -1.48
ABCA3Q99758 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.83□□□□□ -1.48
ABCA3Q99758 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.83□□□□□ -1.48
ABCA3Q99758 RPL5P32-201ENST00000454085 879 ntBASIC5.83□□□□□ -1.48
ABCA3Q99758 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.83□□□□□ -1.48
ABCA3Q99758 BNIP3P19-201ENST00000605397 577 ntBASIC5.83□□□□□ -1.48
ABCA3Q99758 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
ABCA3Q99758 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ABCA3Q99758 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ABCA3Q99758 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCA3Q99758 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.83□□□□□ -1.48
ABCA3Q99758 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.83□□□□□ -1.48
ABCA3Q99758 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ABCA3Q99758 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCA3Q99758 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
ABCA3Q99758 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ABCA3Q99758 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCA3Q99758 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.83□□□□□ -1.48
ABCA3Q99758 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 AL157884.3-201ENST00000448273 1184 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 AC012671.1-201ENST00000451912 203 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 RNA5SP73-201ENST00000516744 108 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.82□□□□□ -1.48
ABCA3Q99758 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.82□□□□□ -1.48
ABCA3Q99758 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCA3Q99758 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCA3Q99758 AC010201.1-201ENST00000605051 540 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCA3Q99758 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCA3Q99758 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCA3Q99758 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 AL591135.1-201ENST00000401578 5914 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
ABCA3Q99758 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 SCARNA15-201ENST00000607520 4325 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCA3Q99758 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ABCA3Q99758 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ABCA3Q99758 RNU11-4P-201ENST00000391149 133 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms