Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 COX5BP7-201ENST00000414780 274 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 AC114814.2-201ENST00000419195 485 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 RPS3AP12-201ENST00000443616 753 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 RNA5SP519-201ENST00000516480 119 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 BPIFA4P-203ENST00000603168 689 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
IFT140Q96RY7 AP005435.3-201ENST00000531260 3198 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
IFT140Q96RY7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
IFT140Q96RY7 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
IFT140Q96RY7 AL157831.1-201ENST00000426134 473 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 RPL7P49-201ENST00000471402 708 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 TVP23BP1-201ENST00000557500 617 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.36□□□□□ -1.23
IFT140Q96RY7 AC023762.1-201ENST00000603280 584 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 AL121772.2-201ENST00000614331 297 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 AC020978.9-201ENST00000624380 1141 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
IFT140Q96RY7 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
IFT140Q96RY7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
IFT140Q96RY7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.35□□□□□ -1.23
IFT140Q96RY7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC7.35□□□□□ -1.23
IFT140Q96RY7 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
IFT140Q96RY7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
IFT140Q96RY7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
IFT140Q96RY7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
IFT140Q96RY7 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.35□□□□□ -1.23
IFT140Q96RY7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
IFT140Q96RY7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC7.35□□□□□ -1.23
IFT140Q96RY7 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 AK4P6-201ENST00000505168 528 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 AC110768.1-201ENST00000509222 400 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 AC026403.1-201ENST00000518938 295 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC7.35□□□□□ -1.23
IFT140Q96RY7 AP000619.3-201ENST00000535634 1127 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 HSPE1P5-201ENST00000561489 272 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 MIR5685-201ENST00000579080 79 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 VN1R92P-201ENST00000598511 928 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 AF131215.7-201ENST00000602443 707 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 AC090181.2-201ENST00000602975 672 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 AL354984.3-201ENST00000604803 325 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 AC096577.2-201ENST00000611455 153 ntBASIC7.35□□□□□ -1.23
IFT140Q96RY7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
IFT140Q96RY7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
IFT140Q96RY7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
IFT140Q96RY7 AC233968.1-201ENST00000611212 1300 ntBASIC7.34□□□□□ -1.23
IFT140Q96RY7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.34□□□□□ -1.23
IFT140Q96RY7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
IFT140Q96RY7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
IFT140Q96RY7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
IFT140Q96RY7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
IFT140Q96RY7 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
IFT140Q96RY7 AP000357.1-201ENST00000409926 1165 ntBASIC7.34□□□□□ -1.23
IFT140Q96RY7 RN7SKP235-201ENST00000410662 305 ntBASIC7.34□□□□□ -1.23
IFT140Q96RY7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.34□□□□□ -1.23
IFT140Q96RY7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.34□□□□□ -1.23
IFT140Q96RY7 NOTCH2P1-201ENST00000443481 624 ntBASIC7.34□□□□□ -1.23
IFT140Q96RY7 AC007688.1-201ENST00000475592 759 ntBASIC7.34□□□□□ -1.23
IFT140Q96RY7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC7.34□□□□□ -1.23
IFT140Q96RY7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.34□□□□□ -1.23
IFT140Q96RY7 AC010608.2-201ENST00000624830 470 ntBASIC7.34□□□□□ -1.23
IFT140Q96RY7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC7.34□□□□□ -1.23
IFT140Q96RY7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
IFT140Q96RY7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
IFT140Q96RY7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
IFT140Q96RY7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
IFT140Q96RY7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
IFT140Q96RY7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
IFT140Q96RY7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
IFT140Q96RY7 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
IFT140Q96RY7 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC7.33□□□□□ -1.24
IFT140Q96RY7 AC104651.2-201ENST00000447549 528 ntBASIC7.33□□□□□ -1.24
IFT140Q96RY7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC7.33□□□□□ -1.24
IFT140Q96RY7 RPL7P15-201ENST00000461190 712 ntBASIC7.33□□□□□ -1.24
IFT140Q96RY7 AC022336.1-201ENST00000475510 337 ntBASIC7.33□□□□□ -1.24
IFT140Q96RY7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
IFT140Q96RY7 AC093014.1-201ENST00000548926 724 ntBASIC7.33□□□□□ -1.24
IFT140Q96RY7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
IFT140Q96RY7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC7.33□□□□□ -1.24
IFT140Q96RY7 AL137918.1-201ENST00000624542 1922 ntBASIC7.33□□□□□ -1.24
IFT140Q96RY7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
IFT140Q96RY7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.33□□□□□ -1.24
IFT140Q96RY7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
IFT140Q96RY7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC7.32□□□□□ -1.24
IFT140Q96RY7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC7.32□□□□□ -1.24
IFT140Q96RY7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
IFT140Q96RY7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
IFT140Q96RY7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms