Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AL355377.1-201ENST00000621125 1653 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 TTC41P-205ENST00000551270 3963 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 SNORA62.2-201ENST00000364672 152 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 RNU5A-6P-201ENST00000384136 116 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 Y_RNA.554-201ENST00000384672 102 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 Y_RNA.582-201ENST00000391023 95 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 RPL17P50-201ENST00000396131 546 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 YWHAZP6-201ENST00000399764 738 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 RNA5SP198-201ENST00000410376 127 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC002524.1-201ENST00000411687 547 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 UBE2V1P14-201ENST00000415815 558 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 GAPDHP59-201ENST00000435908 267 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 UBE2FP3-201ENST00000436366 524 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AL358832.1-201ENST00000497800 389 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 RNU6-314P-201ENST00000516574 104 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AP001189.2-201ENST00000527320 189 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 BCAS2P1-201ENST00000528022 632 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC024405.1-201ENST00000532521 1042 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC023310.2-201ENST00000553844 547 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC233702.7-202ENST00000582941 211 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 SMIM12P1-201ENST00000603004 274 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 OR52B5P-202ENST00000641118 1110 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 AL590763.1-201ENST00000398297 1545 ntBASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCHD1Q96NR3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 RNU6-1066P-201ENST00000363573 105 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 RN7SKP237-201ENST00000364663 301 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 MIR320B1-201ENST00000390209 79 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 MIR1275-201ENST00000408770 80 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 RPL17P12-201ENST00000413391 526 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC016831.2-201ENST00000417179 352 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 RPL24P2-201ENST00000421023 475 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 CACYBPP1-201ENST00000438592 684 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 UBE2V1P7-201ENST00000446395 340 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AL935212.3-201ENST00000450729 284 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 MTND2P24-201ENST00000453434 806 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AL133351.3-201ENST00000454998 193 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC104339.1-201ENST00000465478 348 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 RPL7P38-201ENST00000488396 739 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AP002453.1-201ENST00000492327 668 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 SNX18P24-201ENST00000505249 671 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC018797.1-201ENST00000510791 255 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms