Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 RNA5SP303-201ENST00000516192 130 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC018442.3-201ENST00000523025 183 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC084824.2-201ENST00000548906 345 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC087897.1-201ENST00000550134 156 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 NPM1P42-201ENST00000560329 862 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 ATP5F1P7-201ENST00000567330 760 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC009027.1-201ENST00000604510 479 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC005084.1-201ENST00000605160 304 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC090525.3-201ENST00000605601 189 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AL365400.2-201ENST00000605604 902 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AL035461.2-201ENST00000619201 524 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC138907.10-201ENST00000623708 983 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 PANDAR-201ENST00000629595 1506 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 THAP12P4-201ENST00000528321 2266 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 SEC63P2-201ENST00000503863 1939 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 RNA5SP455-201ENST00000365190 119 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 DBIP1-201ENST00000401435 260 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 GJA6P-201ENST00000415117 1042 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 RPL26P29-201ENST00000415623 438 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 NANOGP5-201ENST00000424456 877 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 HMGB3P5-201ENST00000428894 612 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 MTND2P5-201ENST00000432656 1006 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AL050341.1-201ENST00000447743 313 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 SNORD125-201ENST00000459538 96 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 GYG1P1-201ENST00000460864 698 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 RPS3AP6-201ENST00000484430 795 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 PPP1R11P1-201ENST00000486095 376 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 RN7SKP265-201ENST00000516448 223 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC012400.1-201ENST00000518452 381 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 IGKV2D-10-201ENST00000520194 281 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 MORF4L1P3-201ENST00000525966 950 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AL358913.1-201ENST00000554342 121 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC083837.1-201ENST00000565297 2994 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 MTATP6P24-201ENST00000576835 677 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC060780.2-201ENST00000589047 198 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC125494.2-201ENST00000602431 657 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC087283.1-201ENST00000604029 1074 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AC005377.1-201ENST00000605126 456 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 STMN1P1-201ENST00000617809 440 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 AL109659.3-201ENST00000624985 950 ntBASIC5.31□□□□□ -1.56
HMGB4Q8WW32 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms