Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 BUD31P1-201ENST00000521828 359 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 OR11J2P-201ENST00000555298 907 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 MIR5699-201ENST00000578903 90 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 OR1AB1P-201ENST00000585564 761 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 AC023762.1-201ENST00000603280 584 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 AC133644.2-201ENST00000608142 540 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 LINC00901.1-201ENST00000617252 152 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 MAPK10-304ENST00000641341 3984 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AC067945.1-201ENST00000342609 618 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AL035419.1-201ENST00000397037 564 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AC114755.2-201ENST00000413520 361 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 RBMY2KP-201ENST00000418221 992 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 RPL12P43-201ENST00000420608 499 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 CENPIP1-201ENST00000425713 902 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 FGF7P3-201ENST00000454645 303 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AC090142.1-201ENST00000465776 462 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AC006499.6-201ENST00000511169 607 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AC004980.4-201ENST00000513375 203 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 MIR3934-201ENST00000579806 107 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AC011487.3-201ENST00000593607 453 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 AC132825.8-201ENST00000640783 297 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 MTCO1P15-201ENST00000529569 1526 ntBASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC112Q8NEF3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AL133243.3-201ENST00000617415 3004 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC099654.2-201ENST00000433031 1980 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 MTHFD2P5-201ENST00000320415 844 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 RNA5SP151-201ENST00000365632 117 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 RNU1-44P-201ENST00000384453 163 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC234781.4-201ENST00000419384 244 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 NANOGP6-201ENST00000429190 847 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 ARAFP2-201ENST00000440565 559 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 SLC25A18P1-201ENST00000449385 454 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC090114.3-201ENST00000479267 829 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 RPS6P4-201ENST00000494693 758 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 OR1F2P-201ENST00000570470 933 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC007497.1-201ENST00000610421 561 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AL445528.2-201ENST00000620582 470 ntBASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC112Q8NEF3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC112Q8NEF3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms