Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RAE1P78406 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.08□□□□□ -1.6
RAE1P78406 RNU1-19P-201ENST00000363306 165 ntBASIC5.08□□□□□ -1.6
RAE1P78406 RN7SKP124-201ENST00000364730 341 ntBASIC5.08□□□□□ -1.6
RAE1P78406 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 MIR1282-201ENST00000408865 101 ntBASIC5.08□□□□□ -1.6
RAE1P78406 RN7SKP222-201ENST00000410651 315 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.08□□□□□ -1.6
RAE1P78406 MRPS21P2-201ENST00000424704 264 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.08□□□□□ -1.6
RAE1P78406 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.08□□□□□ -1.6
RAE1P78406 AL161636.2-201ENST00000445179 927 ntBASIC5.08□□□□□ -1.6
RAE1P78406 EXTL2P1-201ENST00000446218 416 ntBASIC5.08□□□□□ -1.6
RAE1P78406 GAPDHP25-201ENST00000447061 1001 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.08□□□□□ -1.6
RAE1P78406 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.08□□□□□ -1.6
RAE1P78406 RPL31P15-201ENST00000449770 338 ntBASIC5.08□□□□□ -1.6
RAE1P78406 USP9YP25-201ENST00000457708 443 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.08□□□□□ -1.6
RAE1P78406 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.08□□□□□ -1.6
RAE1P78406 RPL23AP37-201ENST00000479658 549 ntBASIC5.08□□□□□ -1.6
RAE1P78406 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.08□□□□□ -1.6
RAE1P78406 RPS24P16-201ENST00000497294 392 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC093890.1-201ENST00000502554 540 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC111193.1-201ENST00000504097 155 ntBASIC5.08□□□□□ -1.6
RAE1P78406 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC104108.1-201ENST00000509930 412 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC010486.3-201ENST00000511602 785 ntBASIC5.08□□□□□ -1.6
RAE1P78406 EIF3KP3-201ENST00000514461 639 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.08□□□□□ -1.6
RAE1P78406 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.08□□□□□ -1.6
RAE1P78406 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.08□□□□□ -1.6
RAE1P78406 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.08□□□□□ -1.6
RAE1P78406 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.08□□□□□ -1.6
RAE1P78406 AC005341.1-201ENST00000571086 708 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC016839.1-201ENST00000578162 867 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC008521.2-201ENST00000591021 259 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC010503.3-201ENST00000594355 540 ntBASIC5.08□□□□□ -1.6
RAE1P78406 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.08□□□□□ -1.6
RAE1P78406 AC124856.1-201ENST00000600819 896 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC069304.3-201ENST00000603938 1084 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC104695.2-201ENST00000605056 775 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC010245.2-201ENST00000606908 1167 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AL022394.1-201ENST00000606979 292 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC064807.4-201ENST00000607201 407 ntBASIC5.08□□□□□ -1.6
RAE1P78406 AC024257.5-201ENST00000612739 531 ntBASIC5.08□□□□□ -1.6
RAE1P78406 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.08□□□□□ -1.6
RAE1P78406 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.08□□□□□ -1.6
RAE1P78406 U6.107-201ENST00000637108 79 ntBASIC5.08□□□□□ -1.6
RAE1P78406 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.08□□□□□ -1.6
RAE1P78406 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RAE1P78406 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.08□□□□□ -1.6
RAE1P78406 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RAE1P78406 AL034549.2-201ENST00000618285 3373 ntBASIC5.08□□□□□ -1.6
RAE1P78406 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RAE1P78406 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 AC093311.1-201ENST00000506586 2021 ntBASIC5.07□□□□□ -1.6
RAE1P78406 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
RAE1P78406 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.07□□□□□ -1.6
RAE1P78406 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 AC104454.1-201ENST00000421341 1401 ntBASIC5.07□□□□□ -1.6
RAE1P78406 MTCO1P6-201ENST00000481192 1384 ntBASIC5.07□□□□□ -1.6
RAE1P78406 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
RAE1P78406 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.07□□□□□ -1.6
RAE1P78406 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.07□□□□□ -1.6
RAE1P78406 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RAE1P78406 RNA5SP335-201ENST00000363817 110 ntBASIC5.07□□□□□ -1.6
RAE1P78406 RNU6-98P-201ENST00000384173 107 ntBASIC5.07□□□□□ -1.6
RAE1P78406 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
RAE1P78406 ERHP2-201ENST00000402323 299 ntBASIC5.07□□□□□ -1.6
RAE1P78406 RPL12P9-201ENST00000412942 488 ntBASIC5.07□□□□□ -1.6
RAE1P78406 LINC01881-201ENST00000416103 412 ntBASIC5.07□□□□□ -1.6
RAE1P78406 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.07□□□□□ -1.6
RAE1P78406 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 VTI1BP4-201ENST00000427516 527 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.07□□□□□ -1.6
RAE1P78406 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.07□□□□□ -1.6
RAE1P78406 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.07□□□□□ -1.6
RAE1P78406 AC233982.1-201ENST00000451247 436 ntBASIC5.07□□□□□ -1.6
RAE1P78406 YWHAEP1-201ENST00000453697 763 ntBASIC5.07□□□□□ -1.6
RAE1P78406 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.07□□□□□ -1.6
RAE1P78406 AC108161.1-201ENST00000461060 402 ntBASIC5.07□□□□□ -1.6
RAE1P78406 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.07□□□□□ -1.6
RAE1P78406 PRDX3P4-201ENST00000470828 747 ntBASIC5.07□□□□□ -1.6
RAE1P78406 RN7SL273P-201ENST00000481561 299 ntBASIC5.07□□□□□ -1.6
RAE1P78406 RPL7P41-201ENST00000485823 957 ntBASIC5.07□□□□□ -1.6
RAE1P78406 RN7SL814P-201ENST00000487715 300 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms