Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.38□□□□□ -1.87
CKS1BP61024 YWHAEP1-201ENST00000453697 763 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AL035090.1-201ENST00000454835 332 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AL356981.1-201ENST00000454879 684 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 CEACAMP4-201ENST00000457676 421 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AC007537.2-201ENST00000472093 511 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 EIF1P7-201ENST00000487533 337 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AL117692.1-201ENST00000494283 713 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 RPL7P47-201ENST00000497299 556 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.38□□□□□ -1.87
CKS1BP61024 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CKS1BP61024 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.38□□□□□ -1.87
CKS1BP61024 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.38□□□□□ -1.87
CKS1BP61024 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC3.38□□□□□ -1.87
CKS1BP61024 AC027544.3-201ENST00000535082 757 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.38□□□□□ -1.87
CKS1BP61024 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 AL049830.4-201ENST00000555149 351 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC3.38□□□□□ -1.87
CKS1BP61024 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC3.38□□□□□ -1.87
CKS1BP61024 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC3.38□□□□□ -1.87
CKS1BP61024 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 FO393422.1-201ENST00000603908 708 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC3.38□□□□□ -1.87
CKS1BP61024 AC103710.3-201ENST00000608157 948 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AC048341.3-201ENST00000619323 491 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.38□□□□□ -1.87
CKS1BP61024 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 OR5AC4P-202ENST00000642086 985 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 OTUD4P1-201ENST00000237841 3067 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 Z82217.1-201ENST00000625157 8149 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.38□□□□□ -1.87
CKS1BP61024 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.38□□□□□ -1.87
CKS1BP61024 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 OR13C1P-202ENST00000641378 2919 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CKS1BP61024 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.37□□□□□ -1.87
CKS1BP61024 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CKS1BP61024 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.37□□□□□ -1.87
CKS1BP61024 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CKS1BP61024 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.37□□□□□ -1.87
CKS1BP61024 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CKS1BP61024 SNORA73.1-201ENST00000363107 205 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 SNORA67-201ENST00000384423 137 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CKS1BP61024 VN1R31P-201ENST00000417498 730 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 SLC35E1P1-201ENST00000419313 864 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 LINC00993-201ENST00000420453 540 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 RPS3P2-201ENST00000421346 701 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 AC093655.2-201ENST00000425735 631 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 AC234779.1-201ENST00000425910 285 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.37□□□□□ -1.87
CKS1BP61024 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.37□□□□□ -1.87
CKS1BP61024 AC064862.4-201ENST00000442180 334 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 MRPL48P1-201ENST00000445390 636 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.37□□□□□ -1.87
CKS1BP61024 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.37□□□□□ -1.87
CKS1BP61024 OTX2P1-201ENST00000450956 354 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.37□□□□□ -1.87
CKS1BP61024 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.37□□□□□ -1.87
CKS1BP61024 RPL7P45-201ENST00000455851 743 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 Z92846.1-201ENST00000456203 268 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.37□□□□□ -1.87
CKS1BP61024 PPIAP15-201ENST00000479662 484 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.37□□□□□ -1.87
CKS1BP61024 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.37□□□□□ -1.87
CKS1BP61024 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.37□□□□□ -1.87
CKS1BP61024 RPL23AP53-201ENST00000521854 457 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.37□□□□□ -1.87
CKS1BP61024 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.37□□□□□ -1.87
CKS1BP61024 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.37□□□□□ -1.87
CKS1BP61024 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.37□□□□□ -1.87
CKS1BP61024 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.37□□□□□ -1.87
CKS1BP61024 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CKS1BP61024 RPL10P14-201ENST00000565265 298 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 MIR4458-201ENST00000578872 75 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 MIR1273E-201ENST00000581165 102 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 MIR4512-201ENST00000583257 77 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CKS1BP61024 AC005255.1-201ENST00000593748 216 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC3.37□□□□□ -1.87
CKS1BP61024 HMGB1P50-201ENST00000605814 607 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 AC079395.2-201ENST00000610982 737 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 MIR6889-201ENST00000613185 59 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 AC244100.4-201ENST00000617747 388 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 HOTTIP_3.1-201ENST00000619957 337 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.37□□□□□ -1.87
CKS1BP61024 AC019206.1-201ENST00000621938 425 ntBASIC3.37□□□□□ -1.87
CKS1BP61024 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.37□□□□□ -1.87
CKS1BP61024 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms